RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
CUL1-201ENST00000325222 MYO5AQ9Y4I1 1855 aaKnown RBP16.58■□□□□ 0.25
CUL1-201ENST00000325222 TRPM3Q9HCF6 1732 aaPredicted RBP16.58■□□□□ 0.25
CUL1-201ENST00000325222 ATP2B1P20020 1258 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 CCDC57Q2TAC2 916 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 KLHL10Q6JEL2 608 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 HDXQ7Z353 690 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 CCDC82Q8N4S0 544 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 NOA1Q8NC60 698 aaKnown RBP16.58■□□□□ 0.24
CUL1-201ENST00000325222 SHISA4Q96DD7 197 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 CSRNP2Q9H175 543 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 GEMIN8Q9NWZ8 242 aaKnown RBP16.58■□□□□ 0.24
CUL1-201ENST00000325222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.244e-7■■■■■ 28.4
CUL1-201ENST00000325222 ADD3Q9UEY8 706 aaKnown RBP16.58■□□□□ 0.24
CUL1-201ENST00000325222 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 CASP14P31944 242 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 DPYDQ12882 1025 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 CUL4BQ13620 913 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 ZSWIM5Q9P217 1185 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 AKAP11Q9UKA4 1901 aa16.58■□□□□ 0.24
CUL1-201ENST00000325222 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 MFAP3LO75121 409 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 FMNL1O95466 1100 aaPredicted RBP16.57■□□□□ 0.24
CUL1-201ENST00000325222 GYPCP04921 128 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 CDC25AP30304 524 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 CTDSPL2Q05D32 466 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 SGMS1Q86VZ5 419 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 ERVK-24P63145 666 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 SSRP1Q08945 709 aaKnown RBP16.57■□□□□ 0.24
CUL1-201ENST00000325222 KIF4BQ2VIQ3 1234 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
CUL1-201ENST00000325222 DRC1Q96MC2 740 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 RIC1Q4ADV7 1423 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 MYH7P12883 1935 aa16.57■□□□□ 0.24
CUL1-201ENST00000325222 LRRIQ3A6PVS8 624 aaPredicted RBP16.56■□□□□ 0.24
CUL1-201ENST00000325222 KIF5CO60282 957 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 ARHGAP25P42331 645 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 CEP112Q8N8E3 955 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 EPB41L4AQ9HCS5 686 aaPredicted RBP16.56■□□□□ 0.24
CUL1-201ENST00000325222 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 PHACTR2O75167 634 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 CDKAL1Q5VV42 579 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 ZNF532Q9HCE3 1301 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 ERCC5P28715 1186 aaPredicted RBP16.56■□□□□ 0.24
CUL1-201ENST00000325222 AFMP43652 599 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 CASP8Q14790 479 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 ICE2Q659A1 982 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 TRIML1Q8N9V2 468 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 DDX17Q92841 729 aaKnown RBP16.56■□□□□ 0.24
CUL1-201ENST00000325222 EPSTI1Q96J88 318 aa16.56■□□□□ 0.24
CUL1-201ENST00000325222 BRD2P25440 801 aaKnown RBP16.55■□□□□ 0.24
CUL1-201ENST00000325222 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 PPFIBP1Q86W92 1011 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 ZKSCAN3Q9BRR0 538 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 ISCA1Q9BUE6 129 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 YY1AP1Q9H869 796 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 DACH1Q9UI36 760 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
CUL1-201ENST00000325222 SRPRBQ9Y5M8 271 aaKnown RBP16.55■□□□□ 0.24
CUL1-201ENST00000325222 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 WNT7AO00755 349 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 IDH1O75874 414 aaKnown RBP16.55■□□□□ 0.24
CUL1-201ENST00000325222 IFNAR1P17181 557 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
CUL1-201ENST00000325222 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 EARS2Q5JPH6 523 aaKnown RBP16.54■□□□□ 0.24
CUL1-201ENST00000325222 CWC15Q9P013 229 aaKnown RBP16.54■□□□□ 0.24
CUL1-201ENST00000325222 SLC12A7Q9Y666 1083 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 CTAGE9A4FU28 777 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 PPP1R3GB7ZBB8 358 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 IFIT3O14879 490 aaKnown RBP16.54■□□□□ 0.24
CUL1-201ENST00000325222 FECHP22830 423 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 NCAPH2Q6IBW4 605 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 STRBPQ96SI9 672 aaKnown RBP16.54■□□□□ 0.24
CUL1-201ENST00000325222 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
CUL1-201ENST00000325222 LRRC31Q6UY01 552 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
CUL1-201ENST00000325222 NAA15Q9BXJ9 866 aaKnown RBP16.54■□□□□ 0.24
CUL1-201ENST00000325222 PLEKHA4Q9H4M7 779 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 TRIM10Q9UDY6 481 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 MST1RQ04912 1400 aa16.54■□□□□ 0.24
CUL1-201ENST00000325222 SYNRGQ9UMZ2 1314 aa16.53■□□□□ 0.24
CUL1-201ENST00000325222 PDE6AP16499 860 aa16.53■□□□□ 0.24
CUL1-201ENST00000325222 AMPD2Q01433 879 aa16.53■□□□□ 0.24
CUL1-201ENST00000325222 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
CUL1-201ENST00000325222 CABP5Q9NP86 173 aa16.53■□□□□ 0.24
CUL1-201ENST00000325222 ATRNO75882 1429 aa16.53■□□□□ 0.24
CUL1-201ENST00000325222 CCT6AP40227 531 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms