RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 ARHGAP6O43182 974 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 SASH3O75995 380 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
CRLF3-201ENST00000324238 SPECC1LQ69YQ0 1117 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 WDR19Q8NEZ3 1342 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 CD44P16070 742 aaKnown RBP22.69■■□□□ 1.22
CRLF3-201ENST00000324238 IFNAR1P17181 557 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 PTPREP23469 700 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 MAP3K12Q12852 859 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 FBXO3Q9UK99 471 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 AKAP11Q9UKA4 1901 aa22.69■■□□□ 1.22
CRLF3-201ENST00000324238 ATP6V1AP38606 617 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 ADGRA1Q86SQ6 560 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 PUF60Q9UHX1 559 aaKnown RBP22.68■■□□□ 1.22
CRLF3-201ENST00000324238 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 C4BP0C0L5 1744 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 PKD1L3Q7Z443 1732 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 ZSCAN12O43309 604 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 ABL1P00519 1130 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 CCDC12Q8WUD4 166 aaPredicted RBP22.68■■□□□ 1.22
CRLF3-201ENST00000324238 LPIN2Q92539 896 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 TICAM2Q86XR7 235 aa22.68■■□□□ 1.22
CRLF3-201ENST00000324238 CRACR2BQ8N4Y2 399 aaPredicted RBP22.68■■□□□ 1.22
CRLF3-201ENST00000324238 ZNF174Q15697 407 aa22.67■■□□□ 1.22
CRLF3-201ENST00000324238 LIFRP42702 1097 aa22.67■■□□□ 1.22
CRLF3-201ENST00000324238 GYG1P46976 350 aa22.67■■□□□ 1.22
CRLF3-201ENST00000324238 PPP2R3AQ06190 1150 aa22.67■■□□□ 1.22
CRLF3-201ENST00000324238 TBX2Q13207 712 aaPredicted RBP22.67■■□□□ 1.22
CRLF3-201ENST00000324238 BLZF1Q9H2G9 400 aa22.67■■□□□ 1.22
CRLF3-201ENST00000324238 NIP7Q9Y221 180 aaKnown RBP eCLIP22.67■■□□□ 1.22
CRLF3-201ENST00000324238 DCCP43146 1447 aa22.67■■□□□ 1.22
CRLF3-201ENST00000324238 FAM237AA0A1B0GTK4 181 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 ARID4AP29374 1257 aaPredicted RBP22.66■■□□□ 1.22
CRLF3-201ENST00000324238 KCNJ6P48051 423 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 ZNF654Q8IZM8 581 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 FANCBQ8NB91 859 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 MAPK8IP1Q9UQF2 711 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 LAMB4A4D0S4 1761 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 ACTN4O43707 911 aaKnown RBP22.66■■□□□ 1.22
CRLF3-201ENST00000324238 SLC5A1P13866 664 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 ZNF18P17022 549 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 CDC25AP30304 524 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 CCT6AP40227 531 aaKnown RBP22.66■■□□□ 1.22
CRLF3-201ENST00000324238 MORC3Q14149 939 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 TNS2Q63HR2 1409 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 NEK11Q8NG66 645 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 RAI14Q9P0K7 980 aa22.66■■□□□ 1.22
CRLF3-201ENST00000324238 ERICH2A1L162 156 aa22.65■■□□□ 1.22
CRLF3-201ENST00000324238 RBL2Q08999 1139 aa22.65■■□□□ 1.22
CRLF3-201ENST00000324238 ZRANB2O95218 330 aaKnown RBP eCLIP22.65■■□□□ 1.22
CRLF3-201ENST00000324238 RAD9BQ6WBX8 426 aa22.65■■□□□ 1.22
CRLF3-201ENST00000324238 V9GY48 417 aaPredicted RBP22.65■■□□□ 1.22
CRLF3-201ENST00000324238 NUTM2BA6NNL0 878 aaPredicted RBP22.65■■□□□ 1.22
CRLF3-201ENST00000324238 NUTM2EB1AL46 878 aaPredicted RBP22.65■■□□□ 1.22
CRLF3-201ENST00000324238 PLEKHA8P1O95397 391 aa22.65■■□□□ 1.22
CRLF3-201ENST00000324238 ST5P78524 1137 aa22.65■■□□□ 1.22
CRLF3-201ENST00000324238 NUTM2AQ8IVF1 878 aaPredicted RBP22.65■■□□□ 1.22
CRLF3-201ENST00000324238 UBAC1Q9BSL1 405 aa22.65■■□□□ 1.22
CRLF3-201ENST00000324238 CCP110O43303 1012 aa22.64■■□□□ 1.22
CRLF3-201ENST00000324238 UQCRFS1P1P0C7P4 283 aa22.64■■□□□ 1.22
CRLF3-201ENST00000324238 CYP7A1P22680 504 aa22.64■■□□□ 1.21
CRLF3-201ENST00000324238 PARD6BQ9BYG5 372 aa22.64■■□□□ 1.21
CRLF3-201ENST00000324238 ARGLU1Q9NWB6 273 aaPredicted RBP22.64■■□□□ 1.21
CRLF3-201ENST00000324238 ADAMTS3O15072 1205 aa22.63■■□□□ 1.21
CRLF3-201ENST00000324238 RILPL1Q5EBL4 403 aa22.63■■□□□ 1.21
CRLF3-201ENST00000324238 HOOK1Q9UJC3 728 aaKnown RBP22.63■■□□□ 1.21
CRLF3-201ENST00000324238 VEGFAP15692 232 aaPredicted RBP22.63■■□□□ 1.21
CRLF3-201ENST00000324238 FGFR2P21802 821 aa22.63■■□□□ 1.21
CRLF3-201ENST00000324238 SARSP49591 514 aaKnown RBP22.63■■□□□ 1.21
CRLF3-201ENST00000324238 IGSF22Q8N9C0 903 aa22.63■■□□□ 1.21
CRLF3-201ENST00000324238 MLKLQ8NB16 471 aa22.63■■□□□ 1.21
CRLF3-201ENST00000324238 SYMPKQ92797 1274 aaKnown RBP22.63■■□□□ 1.21
CRLF3-201ENST00000324238 KRT23Q9C075 422 aa22.63■■□□□ 1.21
CRLF3-201ENST00000324238 CDHR2Q9BYE9 1310 aa22.63■■□□□ 1.21
CRLF3-201ENST00000324238 EFCAB8A8MWE9 144 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 CRKLP46109 303 aaKnown RBP22.62■■□□□ 1.21
CRLF3-201ENST00000324238 MAP3K9P80192 1104 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 DPYDQ12882 1025 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 SART3Q15020 963 aaKnown RBP22.62■■□□□ 1.21
CRLF3-201ENST00000324238 ENOX1Q8TC92 643 aaKnown RBP22.62■■□□□ 1.21
CRLF3-201ENST00000324238 KIFC2Q96AC6 838 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 TNKSO95271 1327 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 SPEF2Q9C093 1822 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 DEXIO95424 95 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 TBC1D8O95759 1140 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 DYNLL1P63167 89 aaKnown RBP22.62■■□□□ 1.21
CRLF3-201ENST00000324238 STX10O60499 249 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 NMT2O60551 498 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 NR1I3Q14994 352 aa22.62■■□□□ 1.21
CRLF3-201ENST00000324238 SRPRBQ9Y5M8 271 aaKnown RBP22.62■■□□□ 1.21
CRLF3-201ENST00000324238 PPARAQ07869 468 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 ACRBPQ8NEB7 543 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 WASF1Q92558 559 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 EEF2KMTQ96G04 330 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 NACAP1Q9BZK3 213 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 MTMR7Q9Y216 660 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 MRFAP1Q9Y605 127 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 KCNQ2O43526 872 aa22.61■■□□□ 1.21
CRLF3-201ENST00000324238 CASP14P31944 242 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms