RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
RPP40-201ENST00000319533 NOP58Q9Y2X3 529 aaKnown RBP17.45■□□□□ 0.38
RPP40-201ENST00000319533 FLT1P17948 1338 aa17.45■□□□□ 0.38
RPP40-201ENST00000319533 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
RPP40-201ENST00000319533 JAG1P78504 1218 aa17.44■□□□□ 0.38
RPP40-201ENST00000319533 TTC39AQ5SRH9 613 aa17.44■□□□□ 0.38
RPP40-201ENST00000319533 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
RPP40-201ENST00000319533 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.44■□□□□ 0.38
RPP40-201ENST00000319533 CDK5RAP2Q96SN8 1893 aa17.44■□□□□ 0.38
RPP40-201ENST00000319533 C19orf81C9J6K1 198 aa17.43■□□□□ 0.38
RPP40-201ENST00000319533 HMGCRP04035 888 aa17.43■□□□□ 0.38
RPP40-201ENST00000319533 MAPKAPK5Q8IW41 473 aa17.43■□□□□ 0.38
RPP40-201ENST00000319533 ANKLE1Q8NAG6 615 aa17.43■□□□□ 0.38
RPP40-201ENST00000319533 TGFBRAP1Q8WUH2 860 aa17.43■□□□□ 0.38
RPP40-201ENST00000319533 PLXNB2O15031 1838 aa17.42■□□□□ 0.38
RPP40-201ENST00000319533 A0A1W2PPC1 479 aa17.42■□□□□ 0.38
RPP40-201ENST00000319533 MTMR2Q13614 643 aa17.42■□□□□ 0.38
RPP40-201ENST00000319533 PIH1D3Q9NQM4 214 aaKnown RBP17.42■□□□□ 0.38
RPP40-201ENST00000319533 DBNLQ9UJU6 430 aaKnown RBP17.42■□□□□ 0.38
RPP40-201ENST00000319533 RPTORQ8N122 1335 aa17.42■□□□□ 0.38
RPP40-201ENST00000319533 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
RPP40-201ENST00000319533 EVI5O60447 810 aa17.41■□□□□ 0.38
RPP40-201ENST00000319533 SURF6O75683 361 aaKnown RBP17.41■□□□□ 0.38
RPP40-201ENST00000319533 ZAP70P43403 619 aa17.41■□□□□ 0.38
RPP40-201ENST00000319533 PAWRQ96IZ0 340 aaKnown RBP17.41■□□□□ 0.38
RPP40-201ENST00000319533 P2RX7Q99572 595 aaKnown RBP17.41■□□□□ 0.38
RPP40-201ENST00000319533 TMOD4Q9NZQ9 345 aa17.41■□□□□ 0.38
RPP40-201ENST00000319533 TAOK2Q9UL54 1235 aa17.41■□□□□ 0.38
RPP40-201ENST00000319533 PALD1Q9ULE6 856 aa17.41■□□□□ 0.38
RPP40-201ENST00000319533 ZBTB21Q9ULJ3 1066 aa17.41■□□□□ 0.38
RPP40-201ENST00000319533 MYO5AQ9Y4I1 1855 aaKnown RBP17.41■□□□□ 0.38
RPP40-201ENST00000319533 HERVK_113P62684 666 aa17.4■□□□□ 0.38
RPP40-201ENST00000319533 IRX3P78415 501 aaPredicted RBP17.4■□□□□ 0.38
RPP40-201ENST00000319533 OS9Q13438 667 aaPredicted RBP17.4■□□□□ 0.38
RPP40-201ENST00000319533 MAP3K21Q5TCX8 1036 aa17.4■□□□□ 0.38
RPP40-201ENST00000319533 NECAB2Q7Z6G3 386 aa17.4■□□□□ 0.38
RPP40-201ENST00000319533 TXNRD2Q9NNW7 524 aa17.4■□□□□ 0.38
RPP40-201ENST00000319533 ALPK3Q96L96 1907 aa17.39■□□□□ 0.37
RPP40-201ENST00000319533 XRCC5P13010 732 aaKnown RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 MNX1P50219 401 aaPredicted RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 DYNLL1P63167 89 aaKnown RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 TRIM32Q13049 653 aa17.39■□□□□ 0.37
RPP40-201ENST00000319533 SHROOM1Q2M3G4 852 aaPredicted RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 TMED8Q6PL24 325 aaPredicted RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 CERS3Q8IU89 383 aa17.39■□□□□ 0.37
RPP40-201ENST00000319533 CRACR2BQ8N4Y2 399 aaPredicted RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 GPRC5AQ8NFJ5 357 aa17.39■□□□□ 0.37
RPP40-201ENST00000319533 DIS3LQ8TF46 1054 aaKnown RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 TRIB2Q92519 343 aa17.39■□□□□ 0.37
RPP40-201ENST00000319533 HMX1Q9NP08 348 aaPredicted RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
RPP40-201ENST00000319533 RBPJLQ9UBG7 517 aa17.39■□□□□ 0.37
RPP40-201ENST00000319533 LAMA3Q16787 3333 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 HLA-DOAP06340 250 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 CYP7A1P22680 504 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 TATDN1Q6P1N9 297 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 POTEEQ6S8J3 1075 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 GTF3C2Q8WUA4 911 aaPredicted RBP17.38■□□□□ 0.37
RPP40-201ENST00000319533 SOCS4Q8WXH5 440 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 USP6NLQ92738 828 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
RPP40-201ENST00000319533 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 EMILIN3Q9NT22 766 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 OGDHLQ9ULD0 1010 aa17.38■□□□□ 0.37
RPP40-201ENST00000319533 GDF11O95390 407 aa17.37■□□□□ 0.37
RPP40-201ENST00000319533 MAPK4P31152 587 aa17.37■□□□□ 0.37
RPP40-201ENST00000319533 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
RPP40-201ENST00000319533 C12orf42Q96LP6 360 aa17.37■□□□□ 0.37
RPP40-201ENST00000319533 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
RPP40-201ENST00000319533 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
RPP40-201ENST00000319533 EHD4Q9H223 541 aa17.37■□□□□ 0.37
RPP40-201ENST00000319533 SAP30BPQ9UHR5 308 aaKnown RBP17.37■□□□□ 0.37
RPP40-201ENST00000319533 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
RPP40-201ENST00000319533 PEX10O60683 326 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 RLBP1P12271 317 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 ERVK-9P63128 1117 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 ERVK-24P63145 666 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 Q3C1V9 767 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 USP17L2Q6R6M4 530 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 GDF15Q99988 308 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 NBPF3Q9H094 633 aa17.36■□□□□ 0.37
RPP40-201ENST00000319533 CYP2B6P20813 491 aa17.35■□□□□ 0.37
RPP40-201ENST00000319533 BMP8BP34820 402 aa17.35■□□□□ 0.37
RPP40-201ENST00000319533 MORN1Q5T089 497 aa17.35■□□□□ 0.37
RPP40-201ENST00000319533 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
RPP40-201ENST00000319533 PORCNQ9H237 461 aa17.35■□□□□ 0.37
RPP40-201ENST00000319533 STAP2Q9UGK3 403 aa17.35■□□□□ 0.37
RPP40-201ENST00000319533 MYH1P12882 1939 aa17.35■□□□□ 0.37
RPP40-201ENST00000319533 IDH1O75874 414 aaKnown RBP17.34■□□□□ 0.37
RPP40-201ENST00000319533 GH2P01242 217 aa17.34■□□□□ 0.37
RPP40-201ENST00000319533 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
RPP40-201ENST00000319533 DSG3P32926 999 aa17.34■□□□□ 0.37
RPP40-201ENST00000319533 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
RPP40-201ENST00000319533 GPR142Q7Z601 462 aa17.34■□□□□ 0.37
RPP40-201ENST00000319533 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
RPP40-201ENST00000319533 MIGA1Q8NAN2 632 aa17.34■□□□□ 0.37
RPP40-201ENST00000319533 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
RPP40-201ENST00000319533 DDX60LQ5H9U9 1706 aaKnown RBP17.33■□□□□ 0.37
RPP40-201ENST00000319533 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms