RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MAGEC3Q8TD91 643 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 LEO1Q8WVC0 666 aaPredicted RBP7.52□□□□□ -1.21
ZNF540-201ENST00000316433 EPAS1Q99814 870 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 HAUS7Q99871 368 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 DNAJC25Q9H1X3 360 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 AMOTL2Q9Y2J4 779 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 NEDD4P46934 1319 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 PHLPP1O60346 1717 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 FANCGO15287 622 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 RNF40O75150 1001 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 ZBED6P86452 979 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 SNCBQ16143 134 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 SLC30A9Q6PML9 568 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 TTC6Q86TZ1 520 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 KAZALD1Q96I82 304 aa7.52□□□□□ -1.21
ZNF540-201ENST00000316433 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.52□□□□□ -1.21
ZNF540-201ENST00000316433 ZEB2O60315 1214 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 TAF5LO75529 589 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 RASSF9O75901 435 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 YEATS4O95619 227 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 STX1AQ16623 288 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 ME3Q16798 604 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 RRP12Q5JTH9 1297 aaKnown RBP7.51□□□□□ -1.21
ZNF540-201ENST00000316433 CCDC50Q8IVM0 306 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 SDR16C5Q8N3Y7 309 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 CCDC150Q8NCX0 1101 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 RBM17Q96I25 401 aaKnown RBP7.51□□□□□ -1.21
ZNF540-201ENST00000316433 OSBPL9Q96SU4 736 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 PLA2G12BQ9BX93 195 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 CENPHQ9H3R5 247 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 POTEB2H3BUK9 544 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 GRM8O00222 908 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 RPSAP08865 295 aaKnown RBP7.51□□□□□ -1.21
ZNF540-201ENST00000316433 ARHGAP25P42331 645 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 CDR1P51861 262 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 TUBB2AQ13885 445 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 CASP8Q14790 479 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 ARHGAP22Q7Z5H3 698 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 MPHOSPH8Q99549 860 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 TUBB2BQ9BVA1 445 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 MMADHCQ9H3L0 296 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-201ENST00000316433 SLC39A2Q9NP94 309 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 PCDHGC5Q9Y5F6 944 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 RBM8AQ9Y5S9 174 aaKnown RBP7.51□□□□□ -1.21
ZNF540-201ENST00000316433 DISP2A7MBM2 1401 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 CASZ1Q86V15 1759 aa7.51□□□□□ -1.21
ZNF540-201ENST00000316433 STK36Q9NRP7 1315 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 NAT1P18440 290 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 FECHP22830 423 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SF3B2Q13435 895 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 CCDC40Q4G0X9 1142 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 NUTM2DQ5VT03 806 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 MIS18BP1Q6P0N0 1132 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 LARP1Q6PKG0 1096 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 POLR3EQ9NVU0 708 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 RAB21Q9UL25 225 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 TPCN1Q9ULQ1 816 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 STRCP1A6NGW2 1772 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 PPP1R12BO60237 982 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SASH1O94885 1247 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 PRPF6O94906 941 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 PLCB4Q15147 1175 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 B4GALNT4Q76KP1 1039 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 BRAPQ7Z569 592 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SPATS2Q86XZ4 545 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 BCAS4Q8TDM0 211 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SMARCC1Q92922 1105 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 HOOK2Q96ED9 719 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 FMNL2Q96PY5 1086 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 ARPC5LQ9BPX5 153 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 ABCB6Q9NP58 842 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 CDHR2Q9BYE9 1310 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 MEFVO15553 781 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 PDHBP11177 359 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SLC8A1P32418 973 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 PAPOLAP51003 745 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 IRAK1P51617 712 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 ROR2Q01974 943 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 DNM1Q05193 864 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 PSME1Q06323 249 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 CCDC15Q0P6D6 951 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SFSWAPQ12872 951 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 CDC37Q16543 378 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 KIAA0825Q8IV33 1275 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 ANKRD24Q8TF21 1146 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 C17orf50Q8WW18 174 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 NAT10Q9H0A0 1025 aaKnown RBP7.5□□□□□ -1.21
ZNF540-201ENST00000316433 VCPKMTQ9H867 229 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SUGCTQ9HAC7 445 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 SCN7AQ01118 1682 aa7.5□□□□□ -1.21
ZNF540-201ENST00000316433 ERICH2A1L162 156 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 F6X3S4 739 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 RGL2O15211 777 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 OPA1O60313 960 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 GCLCP48506 637 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-201ENST00000316433 AMPHP49418 695 aa7.49□□□□□ -1.21
ZNF540-201ENST00000316433 AKNAD1Q5T1N1 836 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms