RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RAD18Q9NS91 495 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 RAG1P15918 1043 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 PTPROQ16827 1216 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 DUOXA2Q1HG44 320 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 SLC10A6Q3KNW5 377 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 TRAPPC3LQ5T215 181 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 ZNF787Q6DD87 383 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 TMEM192Q8IY95 271 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 APPBP2Q92624 585 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 TRIM11Q96F44 468 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 LGR4Q9BXB1 951 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 IFT57Q9NWB7 429 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 CRIM1Q9NZV1 1036 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 RSF1Q96T23 1441 aaPredicted RBP5.77□□□□□ -1.49
SMCO3-201ENST00000316048 A0A0A0MRY4 1105 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 ERVK-24P63145 666 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 MLECQ14165 292 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 TTLL4Q14679 1199 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 C21orf62-AS1Q17RA5 79 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 KIAA1211Q6ZU35 1233 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 TMEM87BQ96K49 555 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 KIF2CQ99661 725 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 TMPRSS13Q9BYE2 586 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 ADAM30Q9UKF2 790 aa5.77□□□□□ -1.49
SMCO3-201ENST00000316048 C9IYK1 514 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 SUSD5O60279 629 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 UBOX5O94941 541 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 FAM153BP0C7A2 387 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 SLFN14P0C7P3 912 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 GMPRP36959 345 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 EXOSC6Q5RKV6 272 aaKnown RBP5.76□□□□□ -1.49
SMCO3-201ENST00000316048 PHACTR4Q8IZ21 702 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 FMR1NBQ8N0W7 255 aaPredicted RBP5.76□□□□□ -1.49
SMCO3-201ENST00000316048 AGGF1Q8N302 714 aaeCLIP5.76□□□□□ -1.49
SMCO3-201ENST00000316048 SLC16A10Q8TF71 515 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 SLC6A18Q96N87 628 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 RRAGCQ9HB90 399 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 TACC3Q9Y6A5 838 aa5.76□□□□□ -1.49
SMCO3-201ENST00000316048 PPP1R12AO14974 1030 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 TP53P04637 393 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 ADH5P11766 374 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 SNRPNP63162 240 aaKnown RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 GNPTABQ3T906 1256 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 INTS3Q68E01 1043 aaKnown RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 ACAD11Q709F0 780 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 KIAA0907Q7Z7F0 614 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 HOMER1Q86YM7 354 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 MAP4K3Q8IVH8 894 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 MCATQ8IVS2 390 aaKnown RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 JMYQ8N9B5 988 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 ST13P5Q8NFI4 369 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 XAGE3Q8WTP9 111 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 THAP3Q8WTV1 239 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 RUSC1Q9BVN2 902 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 PHAXQ9H814 394 aaKnown RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 ZNF214Q9UL59 606 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 ADCY3O60266 1144 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 GYS2P54840 703 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 PRAMEF13Q5VWM6 474 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 FOXB2Q5VYV0 432 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 EEPD1Q7L9B9 569 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 SLFN12Q8IYM2 578 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 BAHD1Q8TBE0 780 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 ZNF512BQ96KM6 892 aaPredicted RBP5.75□□□□□ -1.49
SMCO3-201ENST00000316048 CD2APQ9Y5K6 639 aa5.75□□□□□ -1.49
SMCO3-201ENST00000316048 EIF4EBP3O60516 100 aaPredicted RBP5.74□□□□□ -1.49
SMCO3-201ENST00000316048 CLSTN1O94985 981 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 ASMTLO95671 621 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 SLC7A5Q01650 507 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 SLBPQ14493 270 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMCO3-201ENST00000316048 RNF187Q5TA31 235 aaPredicted RBP5.74□□□□□ -1.49
SMCO3-201ENST00000316048 RNF214Q8ND24 703 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 ISL2Q96A47 359 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 FAM105AQ9NUU6 356 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 COL4A3BPQ9Y5P4 624 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 SLC12A7Q9Y666 1083 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 CECR2Q9BXF3 1484 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 FANCGO15287 622 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 SHISA2Q6UWI4 295 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 C16orf86Q6ZW13 317 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 FBXO11Q86XK2 927 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 MRPL41Q8IXM3 137 aaKnown RBP5.74□□□□□ -1.49
SMCO3-201ENST00000316048 SUSD2Q9UGT4 822 aa5.74□□□□□ -1.49
SMCO3-201ENST00000316048 hCG_2014768A0A024R1R8 64 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 CBX2Q14781 532 aaPredicted RBP5.73□□□□□ -1.49
SMCO3-201ENST00000316048 NCAPHQ15003 741 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 YOD1Q5VVQ6 348 aaPredicted RBP5.73□□□□□ -1.49
SMCO3-201ENST00000316048 NUTM2GQ5VZR2 741 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 HID1Q8IV36 788 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 FEZ1Q99689 392 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 SPATA9Q9BWV2 254 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 ACTL7BQ9Y614 415 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 UNC13AQ9UPW8 1703 aa5.73□□□□□ -1.49
SMCO3-201ENST00000316048 RGS13O14921 159 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 DNAJC6O75061 913 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 RAB11FIP3O75154 756 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 EPHX1P07099 455 aa5.72□□□□□ -1.49
SMCO3-201ENST00000316048 YARSP54577 528 aaKnown RBP5.72□□□□□ -1.49
SMCO3-201ENST00000316048 HP1BP3Q5SSJ5 553 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms