RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MKNK2Q9HBH9 465 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 SERTAD1Q9UHV2 236 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 KCNH3Q9ULD8 1083 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 HPS5Q9UPZ3 1129 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 PCDHB6Q9Y5E3 794 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 SLFN14P0C7P3 912 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 MNAT1P51948 309 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 LRRN4CLQ8ND94 238 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 STRBPQ96SI9 672 aaKnown RBP14.39□□□□□ -0.11
RETREG3-201ENST00000309428 EPB41L4AQ9HCS5 686 aaPredicted RBP14.39□□□□□ -0.11
RETREG3-201ENST00000309428 TMEM232C9JQI7 657 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 N4BP3O15049 544 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 UQCRFS1P1P0C7P4 283 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 PCDHA5Q9Y5H7 936 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 MST1RQ04912 1400 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 RIMBP2O15034 1052 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 IRX3P78415 501 aaPredicted RBP14.38□□□□□ -0.11
RETREG3-201ENST00000309428 PICALMQ13492 652 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 DIXDC1Q155Q3 683 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 AKNAD1Q5T1N1 836 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 LLPHQ9BRT6 129 aaKnown RBP14.38□□□□□ -0.11
RETREG3-201ENST00000309428 NFE2L3Q9Y4A8 694 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 TNKSO95271 1327 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 MARCH6O60337 910 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 PLEKHA8P1O95397 391 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 EIF5P55010 431 aaKnown RBP14.38□□□□□ -0.11
RETREG3-201ENST00000309428 CTR9Q6PD62 1173 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 PLA2G4DQ86XP0 818 aa14.38□□□□□ -0.11
RETREG3-201ENST00000309428 ATP2C2O75185 946 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 PRDX5P30044 214 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 ITPK1Q13572 414 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 DPF2Q92785 391 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 TRIM66O15016 1216 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 ST5P78524 1137 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 SF3A3Q12874 501 aaKnown RBP eCLIP14.37□□□□□ -0.11
RETREG3-201ENST00000309428 ADALQ6DHV7 355 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 PIK3AP1Q6ZUJ8 805 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 IQCA1Q86XH1 822 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 PDE11AQ9HCR9 933 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 MROH7-TTC4A0A0A0MT08 1334 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
RETREG3-201ENST00000309428 DYNLL2Q96FJ2 89 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
RETREG3-201ENST00000309428 CCDC175P0C221 793 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CHMP4BP1P59074 171 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 ADGRA1Q86SQ6 560 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 SLC44A5Q8NCS7 719 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 PSMB7Q99436 277 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 ELP1O95163 1332 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 FAM208AQ9UK61 1670 aaKnown RBP14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CTAGE15A4D2H0 777 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CTAGE8P0CG41 777 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CTAGE6Q86UF2 777 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CTAGE4Q8IX94 777 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CDC5LQ99459 802 aaKnown RBP14.36□□□□□ -0.11
RETREG3-201ENST00000309428 JADE2Q9NQC1 790 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 C6orf229H3BNL8 230 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 FOXP2O15409 715 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CTIFO43310 598 aaKnown RBP14.36□□□□□ -0.11
RETREG3-201ENST00000309428 ZMYND10O75800 440 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CIAO1O76071 339 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 PPARAQ07869 468 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 CATIPQ7Z7H3 387 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 SETDB2Q96T68 719 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 IRX2Q9BZI1 471 aaPredicted RBP14.36□□□□□ -0.11
RETREG3-201ENST00000309428 DACH1Q9UI36 760 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 MORC2Q9Y6X9 1032 aaPredicted RBP14.36□□□□□ -0.11
RETREG3-201ENST00000309428 RGPD5Q99666 1765 aa14.36□□□□□ -0.11
RETREG3-201ENST00000309428 SH2B2O14492 632 aaPredicted RBP14.35□□□□□ -0.11
RETREG3-201ENST00000309428 RNF187Q5TA31 235 aaPredicted RBP14.35□□□□□ -0.11
RETREG3-201ENST00000309428 CCDC181Q5TID7 509 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 RASGRP2Q7LDG7 609 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 CTCFLQ8NI51 663 aaPredicted RBP14.35□□□□□ -0.11
RETREG3-201ENST00000309428 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 XRN1Q8IZH2 1706 aaKnown RBP14.35□□□□□ -0.11
RETREG3-201ENST00000309428 PRR29P0C7W0 189 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 E2F4Q16254 413 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 HEATR3Q7Z4Q2 680 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 MAPKAPK5Q8IW41 473 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 KCNB2Q92953 911 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 SOS2Q07890 1332 aaPredicted RBP14.35□□□□□ -0.11
RETREG3-201ENST00000309428 ESR2Q92731 530 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 VPS16Q9H269 839 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 PPP2R2CQ9Y2T4 447 aa14.35□□□□□ -0.11
RETREG3-201ENST00000309428 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 KIAA0754O94854 1291 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 FMR1NBQ8N0W7 255 aaPredicted RBP14.34□□□□□ -0.11
RETREG3-201ENST00000309428 USP17L8P0C7I0 530 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 XBP1P17861 261 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 RBM6P78332 1123 aaKnown RBP14.34□□□□□ -0.11
RETREG3-201ENST00000309428 NBPF3Q9H094 633 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 CLSTN1O94985 981 aa14.34□□□□□ -0.11
RETREG3-201ENST00000309428 RDXP35241 583 aaKnown RBP14.34□□□□□ -0.11
RETREG3-201ENST00000309428 TTC19Q6DKK2 380 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms