RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 PLCG2P16885 1265 aa26.07■■□□□ 1.76
PDLIM2-202ENST00000308354 KIF23Q02241 960 aaPredicted RBP26.07■■□□□ 1.76
PDLIM2-202ENST00000308354 PICALMQ13492 652 aa26.07■■□□□ 1.76
PDLIM2-202ENST00000308354 CRACR2BQ8N4Y2 399 aaPredicted RBP26.07■■□□□ 1.76
PDLIM2-202ENST00000308354 CCDC196A0A1B0GTZ2 297 aa26.07■■□□□ 1.76
PDLIM2-202ENST00000308354 C21orf2O43822 256 aa26.07■■□□□ 1.76
PDLIM2-202ENST00000308354 TROAPQ12815 778 aa26.07■■□□□ 1.76
PDLIM2-202ENST00000308354 AOC3Q16853 763 aa26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 PODNQ7Z5L7 613 aa26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 CERS3Q8IU89 383 aa26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 PDLIM2Q96JY6 352 aa26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 IL17RBQ9NRM6 502 aa26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 NAV1Q8NEY1 1877 aa26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 TRIM22Q8IYM9 498 aa26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 ZNF396Q96N95 335 aaPredicted RBP26.06■■□□□ 1.76
PDLIM2-202ENST00000308354 USP17L3A6NCW0 530 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 USP17L4A6NCW7 530 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 ECE2O60344 883 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 RCAN1P53805 252 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 RCSD1Q6JBY9 416 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 USP17L1Q7RTZ2 530 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 CDK5RAP2Q96SN8 1893 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 STK36Q9NRP7 1315 aa26.05■■□□□ 1.76
PDLIM2-202ENST00000308354 hCG_1642624A0A1W2PR95 340 aa26.04■■□□□ 1.76
PDLIM2-202ENST00000308354 PLEKHA8P1O95397 391 aa26.04■■□□□ 1.76
PDLIM2-202ENST00000308354 FUCA2Q9BTY2 467 aa26.04■■□□□ 1.76
PDLIM2-202ENST00000308354 SUGT1Q9Y2Z0 365 aa26.04■■□□□ 1.76
PDLIM2-202ENST00000308354 QSER1Q2KHR3 1735 aa26.04■■□□□ 1.76
PDLIM2-202ENST00000308354 ROBO3Q96MS0 1386 aa26.04■■□□□ 1.76
PDLIM2-202ENST00000308354 RCOR1Q9UKL0 485 aa26.04■■□□□ 1.76
PDLIM2-202ENST00000308354 ECM29Q5VYK3 1845 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 ESPNB1AK53 854 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 TRIM29Q14134 588 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 KIAA0825Q8IV33 1275 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 ZNF444Q8N0Y2 327 aaPredicted RBP26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 BICD2Q8TD16 824 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 DACT1Q9NYF0 836 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 TSPY3P0CV98 308 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 TSPY8P0CW00 308 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 MYSM1Q5VVJ2 828 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 KCNJ14Q9UNX9 436 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 CLIC4Q9Y696 253 aa26.03■■□□□ 1.76
PDLIM2-202ENST00000308354 NUP62CLQ9H1M0 184 aa26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 PCDHAC2Q9Y5I4 1007 aa26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 RASA1P20936 1047 aa26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 CDK8P49336 464 aa26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 GNL2Q13823 731 aaKnown RBP26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 CAMK4Q16566 473 aa26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 BRAPQ7Z569 592 aa26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 DDX4Q9NQI0 724 aaKnown RBP26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 USP40Q9NVE5 1235 aa26.02■■□□□ 1.76
PDLIM2-202ENST00000308354 DEXIO95424 95 aa26.01■■□□□ 1.75
PDLIM2-202ENST00000308354 ADAMTSL1Q8N6G6 1762 aa26.01■■□□□ 1.75
PDLIM2-202ENST00000308354 WASF1Q92558 559 aa26■■□□□ 1.75
PDLIM2-202ENST00000308354 C10orf71Q711Q0 1435 aa26■■□□□ 1.75
PDLIM2-202ENST00000308354 WDHD1O75717 1129 aaPredicted RBP26■■□□□ 1.75
PDLIM2-202ENST00000308354 DDAH1O94760 285 aa26■■□□□ 1.75
PDLIM2-202ENST00000308354 FUT2Q10981 343 aa26■■□□□ 1.75
PDLIM2-202ENST00000308354 ATL3Q6DD88 541 aa26■■□□□ 1.75
PDLIM2-202ENST00000308354 TEKT1Q969V4 418 aa26■■□□□ 1.75
PDLIM2-202ENST00000308354 DLEC1Q9Y238 1755 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 NR1I2O75469 434 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 CALM1P0DP23 149 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 CALM2P0DP24 149 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 CALM3P0DP25 149 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 PPP2R5BQ15173 497 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 DACT2Q5SW24 774 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 APOBEC3HQ6NTF7 200 aaKnown RBP25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 C16orf86Q6ZW13 317 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 KAT14Q9H8E8 782 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 RTEL1Q9NZ71 1219 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 MTMR7Q9Y216 660 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 V9GY48 417 aaPredicted RBP25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 SCN9AQ15858 1988 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 ZBTB7AO95365 584 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 DPEP1P16444 411 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 ME1P48163 572 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 STRIP1Q5VSL9 837 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 CDC42EP5Q6NZY7 148 aa25.99■■□□□ 1.75
PDLIM2-202ENST00000308354 CRKP46108 304 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 MAP3K11Q16584 847 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 TTLL6Q8N841 843 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 CTCFLQ8NI51 663 aaPredicted RBP25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 RBM28Q9NW13 759 aaKnown RBP25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 STX8Q9UNK0 236 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 SNED1Q8TER0 1413 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 BTBD18B2RXH4 712 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 PPIP5K2O43314 1243 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 AKAP17AQ02040 695 aaKnown RBP25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 KIAA2012Q0VF49 1180 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 TMTC3Q6ZXV5 915 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 KLHL34Q8N239 644 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 SRBD1Q8N5C6 995 aaKnown RBP25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 PIBF1Q8WXW3 757 aa25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 RNF26Q9BY78 433 aaPredicted RBP25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 DDX19AQ9NUU7 478 aaKnown RBP25.98■■□□□ 1.75
PDLIM2-202ENST00000308354 KCNA3P22001 575 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 PKN1Q16512 942 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 HHIPL2Q6UWX4 724 aa25.97■■□□□ 1.75
PDLIM2-202ENST00000308354 DGKHQ86XP1 1220 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms