RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 PPP1R9BQ96SB3 815 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 GLT8D2Q9H1C3 349 aa12.89□□□□□ -0.35
PCDHGC3-201ENST00000308177 BTDP43251 543 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 SNAP23O00161 211 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 ADCY7P51828 1080 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 LARGE2Q8N3Y3 721 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 MAPK8IP1Q9UQF2 711 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 LUC7L2Q9Y383 392 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 DDAH1O94760 285 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 SERPINB2P05120 415 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 USP8P40818 1118 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 PDE4DQ08499 809 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 SERTAD1Q9UHV2 236 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 CEP170BQ9Y4F5 1589 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 MCM3P25205 808 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 PNOCQ13519 176 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 CNGA4Q8IV77 575 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 REXO1Q8N1G1 1221 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 STRBPQ96SI9 672 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 PXDNLA1KZ92 1463 aa12.88□□□□□ -0.35
PCDHGC3-201ENST00000308177 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 SCG2P13521 617 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 PPP1R2P41236 205 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 NOP2P46087 812 aaKnown RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 STAMQ92783 540 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 TTC14Q96N46 770 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 BAG1Q99933 345 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 CENPHQ9H3R5 247 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 MAP2P11137 1827 aaKnown RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 A0A1W2PQ27 194 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 A0A1W2PQ64 194 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 A0A1W2PQD8 194 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 CYP2E1P05181 493 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 TOB2Q14106 344 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 SUPT20HQ8NEM7 779 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 ARHGEF10LQ9HCE6 1279 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 NDUFA8P51970 172 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 CBX1P83916 185 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 BLIDQ8IZY5 108 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 AKR1B15C9JRZ8 316 aaPredicted RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 TRIM37O94972 964 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 SLU7O95391 586 aaKnown RBP12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
PCDHGC3-201ENST00000308177 SYNRGQ9UMZ2 1314 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 SMCO2A6NFE2 343 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 KLRF2D3W0D1 207 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 SLC39A14Q15043 492 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 IGSF22Q8N9C0 903 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 CCDC42Q96M95 316 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 RNF26Q9BY78 433 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 VPS16Q9H269 839 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 BBOX1O75936 387 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 ATG9AQ7Z3C6 839 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 CCDC65Q8IXS2 484 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 CLIC6Q96NY7 704 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 POLR3EQ9NVU0 708 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 FAM13AO94988 1023 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 LIFRP42702 1097 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 KRT83P78385 493 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 SETQ01105 290 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 PDIA6Q15084 440 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 SYT10Q6XYQ8 523 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 TMCO5BA8MYB1 307 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 PAK1Q13153 545 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 KARSQ15046 597 aaKnown RBP12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 HS2ST1Q7LGA3 356 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 C17orf53Q8N3J3 647 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 LZTFL1Q9NQ48 299 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 IMPACTQ9P2X3 320 aa12.86□□□□□ -0.35
PCDHGC3-201ENST00000308177 IFNAR1P17181 557 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 SCNN1DP51172 638 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 KIF23Q02241 960 aaPredicted RBP12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 CNNM4Q6P4Q7 775 aa12.85□□□□□ -0.35
PCDHGC3-201ENST00000308177 SRRTQ9BXP5 876 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms