RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 MCM6Q14566 821 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 LPIN2Q92539 896 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 ATP10BO94823 1461 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 TEX14Q8IWB6 1497 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 SLC8A3P57103 927 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 CALCRLQ16602 461 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 SPOPO43791 374 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 CYP4A11Q02928 519 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 HERC4Q5GLZ8 1057 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-201ENST00000303354 UBLCP1Q8WVY7 318 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-201ENST00000303354 RIOK1Q9BRS2 568 aaKnown RBP8.73□□□□□ -1.01
SCN9A-201ENST00000303354 SMCO2A6NFE2 343 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 MYL3P08590 195 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 XKR9Q5GH70 373 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 IRAK4Q9NWZ3 460 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 PALD1Q9ULE6 856 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 AFG3L2Q9Y4W6 797 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 TMEM232C9JQI7 657 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 PTPN21Q16825 1174 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 ZBTB33Q86T24 672 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 CCDC155Q8N6L0 562 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 FAM204AQ9H8W3 233 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 LRFN2Q9ULH4 789 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
SCN9A-201ENST00000303354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 JAK2O60674 1132 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 KCNG4Q8TDN1 519 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 CCT6BQ92526 530 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 CCDC42Q96M95 316 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 EIF4G3O43432 1585 aaKnown RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 R3HDM1Q15032 1099 aaKnown RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 DEPTORQ8TB45 409 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 FTOQ9C0B1 505 aaKnown RBP eCLIP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 LOC102724428A0A0B4J2F2 783 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 SIK1P57059 783 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 IFI16Q16666 785 aaKnown RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 CABP7Q86V35 215 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 CHMLP26374 656 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 ADORA1P30542 326 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 ADAT2Q7Z6V5 191 aaKnown RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 CCPG1Q9ULG6 757 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 ZBTB24O43167 697 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 MAP9Q49MG5 647 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 SMC1BQ8NDV3 1235 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 ESPNB1AK53 854 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
SCN9A-201ENST00000303354 TTC12Q9H892 705 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 SEPT9Q9UHD8 586 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 DLATP10515 647 aaKnown RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 ZNF772Q68DY9 489 aaPredicted RBP8.72□□□□□ -1.01
SCN9A-201ENST00000303354 EXOC3O60645 756 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 ARID4AP29374 1257 aaPredicted RBP8.71□□□□□ -1.01
SCN9A-201ENST00000303354 PSMD6Q15008 389 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 SKA2Q8WVK7 121 aaPredicted RBP8.71□□□□□ -1.01
SCN9A-201ENST00000303354 BMP2KLQ5H9B9 411 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 GIMAP7Q8NHV1 300 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 DNM3Q9UQ16 869 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 FAM196BA6NMK8 535 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 GAS8O95995 478 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 TPD52P55327 224 aaPredicted RBP8.71□□□□□ -1.01
SCN9A-201ENST00000303354 ABI1Q8IZP0 508 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 LRWD1Q9UFC0 647 aa8.71□□□□□ -1.01
SCN9A-201ENST00000303354 LLGL1Q15334 1064 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 DCLK2Q8N568 766 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 CSRNP1Q96S65 589 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 HELLSQ9NRZ9 838 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 CCDC160A6NGH7 325 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 LRRIQ4A6NIV6 560 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 PHKG2P15735 406 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 RASGRP4Q8TDF6 673 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 OATP04181 439 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 RPS6KB1P23443 525 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 IL13P35225 146 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 CKAP4Q07065 602 aaKnown RBP8.71□□□□□ -1.02
SCN9A-201ENST00000303354 PPARAQ07869 468 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 ZBTB1Q9Y2K1 713 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 CCDC66A2RUB6 948 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 ZBTB16Q05516 673 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 RNASELQ05823 741 aaKnown RBP8.71□□□□□ -1.02
SCN9A-201ENST00000303354 KAZNQ674X7 775 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 FBF1Q8TES7 1133 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 PALM3A6NDB9 673 aaPredicted RBP8.71□□□□□ -1.02
SCN9A-201ENST00000303354 ZBBXA8MT70 800 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 TTC38Q5R3I4 469 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 NLRC4Q9NPP4 1024 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 RNF181Q9P0P0 153 aa8.71□□□□□ -1.02
SCN9A-201ENST00000303354 GAS7O60861 476 aa8.7□□□□□ -1.02
SCN9A-201ENST00000303354 ASIC2Q16515 512 aa8.7□□□□□ -1.02
SCN9A-201ENST00000303354 ZNF277Q9NRM2 450 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-201ENST00000303354 TAB2Q9NYJ8 693 aa8.7□□□□□ -1.02
SCN9A-201ENST00000303354 MOSPD1Q9UJG1 213 aa8.7□□□□□ -1.02
SCN9A-201ENST00000303354 MAST3O60307 1309 aa8.7□□□□□ -1.02
SCN9A-201ENST00000303354 CALUO43852 315 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-201ENST00000303354 SKILP12757 684 aa8.7□□□□□ -1.02
SCN9A-201ENST00000303354 MAP7D1Q3KQU3 841 aa8.7□□□□□ -1.02
SCN9A-201ENST00000303354 SYT10Q6XYQ8 523 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms