RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 GOLGA6DP0CG33 693 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 TDO2P48775 406 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.34
TRUB1-201ENST00000298746 TBX2Q13207 712 aaPredicted RBP12.9□□□□□ -0.34
TRUB1-201ENST00000298746 SPATA1Q5VX52 437 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 TTLL7Q6ZT98 887 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 GOLGA6AQ9NYA3 693 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
TRUB1-201ENST00000298746 PPFIA4O75335 1185 aa12.9□□□□□ -0.35
TRUB1-201ENST00000298746 KIAA0754O94854 1291 aa12.9□□□□□ -0.35
TRUB1-201ENST00000298746 FXR1P51114 621 aaKnown RBP eCLIP12.9□□□□□ -0.35
TRUB1-201ENST00000298746 NAP1L1P55209 391 aaKnown RBP12.9□□□□□ -0.35
TRUB1-201ENST00000298746 NR1I3Q14994 352 aa12.9□□□□□ -0.35
TRUB1-201ENST00000298746 RTN1Q16799 776 aa12.9□□□□□ -0.35
TRUB1-201ENST00000298746 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.35
TRUB1-201ENST00000298746 CYP26C1Q6V0L0 522 aa12.9□□□□□ -0.35
TRUB1-201ENST00000298746 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.35
TRUB1-201ENST00000298746 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 ABL1P00519 1130 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 TUBBP07437 444 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 XBP1P17861 261 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 MCM3P25205 808 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
TRUB1-201ENST00000298746 CTDSPL2Q05D32 466 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 TUBB2AQ13885 445 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 SCARF1Q14162 830 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 CTCFLQ8NI51 663 aaPredicted RBP12.89□□□□□ -0.35
TRUB1-201ENST00000298746 HNRNPLLQ8WVV9 542 aaKnown RBP12.89□□□□□ -0.35
TRUB1-201ENST00000298746 EEF2KMTQ96G04 330 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 TUBB2BQ9BVA1 445 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 CENPHQ9H3R5 247 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 RFX7Q2KHR2 1363 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 DNA2P51530 1060 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 MRPS25P82663 173 aaKnown RBP12.89□□□□□ -0.35
TRUB1-201ENST00000298746 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
TRUB1-201ENST00000298746 TRIM10Q9UDY6 481 aa12.89□□□□□ -0.35
TRUB1-201ENST00000298746 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 TRIM75PA6NK02 468 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 TBC1D10CQ8IV04 446 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 BCAS4Q8TDM0 211 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 GNL3LQ9NVN8 582 aaKnown RBP12.88□□□□□ -0.35
TRUB1-201ENST00000298746 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 PALLDQ8WX93 1383 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 ZEB2O60315 1214 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
TRUB1-201ENST00000298746 RABL6Q3YEC7 729 aaPredicted RBP12.88□□□□□ -0.35
TRUB1-201ENST00000298746 LDHAL6AQ6ZMR3 332 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 PSMB7Q99436 277 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 FAM107BQ9H098 131 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 SAR1BQ9Y6B6 198 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 A0A1B0GTH6 734 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 GOLGA6BA6NDN3 693 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 A1BGP04217 495 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 ZNF174Q15697 407 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 TFR2Q9UP52 801 aa12.88□□□□□ -0.35
TRUB1-201ENST00000298746 ADAMTS13Q76LX8 1427 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 MORC3Q14149 939 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 CCDC181Q5TID7 509 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 SND1Q7KZF4 910 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 TADA2BQ86TJ2 420 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 MAP3K14Q99558 947 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 LUC7L2Q9Y383 392 aaKnown RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 EPN1Q9Y6I3 576 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 CHD2O14647 1828 aaKnown RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 UBN2Q6ZU65 1347 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 A0A0G2JS52 829 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 MINDY4BA8MYZ0 360 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 SH2B2O14492 632 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 ZNF18P17022 549 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 GGCXP38435 758 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 WTAPQ15007 396 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 THEMISQ8N1K5 641 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 TRIML1Q8N9V2 468 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 MSANTD4Q8NCY6 345 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 MAGEC2Q9UBF1 373 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 PLEKHG2Q9H7P9 1386 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 PTPREP23469 700 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 USP8P40818 1118 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 CORO7P57737 925 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
TRUB1-201ENST00000298746 MYCBPQ99417 103 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
TRUB1-201ENST00000298746 RNF187Q5TA31 235 aaPredicted RBP12.86□□□□□ -0.35
TRUB1-201ENST00000298746 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 TMEM87BQ96K49 555 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 RAB21Q9UL25 225 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms