RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 LAMB1P07942 1786 aa28.09■■■□□ 2.09
SHISA5-201ENST00000296444 RAD17O75943 681 aa28.09■■■□□ 2.09
SHISA5-201ENST00000296444 PLEKHA8P1O95397 391 aa28.09■■■□□ 2.09
SHISA5-201ENST00000296444 CRKP46108 304 aa28.09■■■□□ 2.09
SHISA5-201ENST00000296444 NBPF11Q86T75 865 aa28.09■■■□□ 2.09
SHISA5-201ENST00000296444 TROAPQ12815 778 aa28.08■■■□□ 2.09
SHISA5-201ENST00000296444 RASA1P20936 1047 aa28.08■■■□□ 2.09
SHISA5-201ENST00000296444 PDE4BQ07343 736 aa28.08■■■□□ 2.09
SHISA5-201ENST00000296444 CCDC173Q0VFZ6 552 aa28.08■■■□□ 2.09
SHISA5-201ENST00000296444 STRIP1Q5VSL9 837 aa28.08■■■□□ 2.09
SHISA5-201ENST00000296444 FBXO18Q8NFZ0 1043 aa28.08■■■□□ 2.09
SHISA5-201ENST00000296444 C8orf76Q96K31 380 aa28.08■■■□□ 2.09
SHISA5-201ENST00000296444 DHX16O60231 1041 aaKnown RBP28.07■■■□□ 2.08
SHISA5-201ENST00000296444 VEGFAP15692 232 aaPredicted RBP28.07■■■□□ 2.08
SHISA5-201ENST00000296444 RTN1Q16799 776 aa28.07■■■□□ 2.08
SHISA5-201ENST00000296444 TMED8Q6PL24 325 aaPredicted RBP28.07■■■□□ 2.08
SHISA5-201ENST00000296444 MKNK2Q9HBH9 465 aa28.07■■■□□ 2.08
SHISA5-201ENST00000296444 MTMR7Q9Y216 660 aa28.07■■■□□ 2.08
SHISA5-201ENST00000296444 CDK8P49336 464 aa28.07■■■□□ 2.08
SHISA5-201ENST00000296444 IQCA1Q86XH1 822 aa28.07■■■□□ 2.08
SHISA5-201ENST00000296444 ALG1Q9BT22 464 aa28.07■■■□□ 2.08
SHISA5-201ENST00000296444 ZBTB12Q9Y330 459 aaPredicted RBP28.07■■■□□ 2.08
SHISA5-201ENST00000296444 NAV1Q8NEY1 1877 aa28.06■■■□□ 2.08
SHISA5-201ENST00000296444 TMEM87AQ8NBN3 555 aa28.06■■■□□ 2.08
SHISA5-201ENST00000296444 IARSP41252 1262 aaKnown RBP28.06■■■□□ 2.08
SHISA5-201ENST00000296444 TCP10Q12799 353 aa28.06■■■□□ 2.08
SHISA5-201ENST00000296444 ZNF646O15015 1829 aaPredicted RBP28.05■■■□□ 2.08
SHISA5-201ENST00000296444 RBM5P52756 815 aaKnown RBP eCLIP28.05■■■□□ 2.08
SHISA5-201ENST00000296444 CLEC10AQ8IUN9 316 aa28.05■■■□□ 2.08
SHISA5-201ENST00000296444 UPF1Q92900 1129 aaKnown RBP eCLIP28.05■■■□□ 2.082e-12■■■■■ 45.3
SHISA5-201ENST00000296444 PPP1R9BQ96SB3 815 aa28.05■■■□□ 2.08
SHISA5-201ENST00000296444 ATP6V1DQ9Y5K8 247 aa28.05■■■□□ 2.08
SHISA5-201ENST00000296444 SHROOM1Q2M3G4 852 aaPredicted RBP28.04■■■□□ 2.08
SHISA5-201ENST00000296444 ZSCAN23Q3MJ62 389 aa28.04■■■□□ 2.08
SHISA5-201ENST00000296444 SYNE3Q6ZMZ3 975 aa28.04■■■□□ 2.08
SHISA5-201ENST00000296444 TEKT1Q969V4 418 aa28.04■■■□□ 2.08
SHISA5-201ENST00000296444 FAM196BA6NMK8 535 aa28.04■■■□□ 2.08
SHISA5-201ENST00000296444 CCDC125Q86Z20 511 aa28.04■■■□□ 2.08
SHISA5-201ENST00000296444 PIBF1Q8WXW3 757 aa28.04■■■□□ 2.08
SHISA5-201ENST00000296444 USP28Q96RU2 1077 aa28.04■■■□□ 2.08
SHISA5-201ENST00000296444 DDX60LQ5H9U9 1706 aaKnown RBP28.04■■■□□ 2.08
SHISA5-201ENST00000296444 FUT2Q10981 343 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 SLF2Q8IX21 1173 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 CRACR2BQ8N4Y2 399 aaPredicted RBP28.03■■■□□ 2.08
SHISA5-201ENST00000296444 LEO1Q8WVC0 666 aaPredicted RBP28.03■■■□□ 2.08
SHISA5-201ENST00000296444 KCNJ14Q9UNX9 436 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 SUGT1Q9Y2Z0 365 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 MYH1P12882 1939 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 IFNAR1P17181 557 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 CCDC93Q567U6 631 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 MTFR1LQ9H019 292 aa28.03■■■□□ 2.08
SHISA5-201ENST00000296444 SLC3A2P08195 630 aaKnown RBP28.02■■■□□ 2.08
SHISA5-201ENST00000296444 HHIPL2Q6UWX4 724 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 TMTC2Q8N394 836 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 PGBD1Q96JS3 809 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 PDCL3Q9H2J4 239 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 ROBO3Q96MS0 1386 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 KRT85P78386 507 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 KRT40Q6A162 431 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 C16orf86Q6ZW13 317 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 SGIP1Q9BQI5 828 aa28.02■■■□□ 2.08
SHISA5-201ENST00000296444 PLCG2P16885 1265 aa28.01■■■□□ 2.07
SHISA5-201ENST00000296444 TERF1P54274 439 aa28.01■■■□□ 2.07
SHISA5-201ENST00000296444 LARGE2Q8N3Y3 721 aa28.01■■■□□ 2.07
SHISA5-201ENST00000296444 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.01■■■□□ 2.07
SHISA5-201ENST00000296444 DLEC1Q9Y238 1755 aa28.01■■■□□ 2.07
SHISA5-201ENST00000296444 PSMD14O00487 310 aa28.01■■■□□ 2.07
SHISA5-201ENST00000296444 FMNL1O95466 1100 aaPredicted RBP28.01■■■□□ 2.07
SHISA5-201ENST00000296444 PCP11498 1178 aaKnown RBP28.01■■■□□ 2.07
SHISA5-201ENST00000296444 STAG2Q8N3U4 1231 aa28.01■■■□□ 2.07
SHISA5-201ENST00000296444 SRBD1Q8N5C6 995 aaKnown RBP28.01■■■□□ 2.07
SHISA5-201ENST00000296444 PRMT6Q96LA8 375 aaPredicted RBP28.01■■■□□ 2.07
SHISA5-201ENST00000296444 MTA3Q9BTC8 594 aa28.01■■■□□ 2.07
SHISA5-201ENST00000296444 TSPY3P0CV98 308 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 TSPY8P0CW00 308 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 SSRP1Q08945 709 aaKnown RBP28■■■□□ 2.07
SHISA5-201ENST00000296444 ZNF444Q8N0Y2 327 aaPredicted RBP28■■■□□ 2.07
SHISA5-201ENST00000296444 TDRD3Q9H7E2 651 aaKnown RBP28■■■□□ 2.07
SHISA5-201ENST00000296444 ECM29Q5VYK3 1845 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 SLC35G1Q2M3R5 365 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 ZDHHC15Q96MV8 337 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 CPVLQ9H3G5 476 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 PIM2Q9P1W9 311 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 FAM198AQ9UFP1 575 aa28■■■□□ 2.07
SHISA5-201ENST00000296444 SHTN1A0MZ66 631 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 IGSF3O75054 1194 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 KIF23Q02241 960 aaPredicted RBP27.99■■■□□ 2.07
SHISA5-201ENST00000296444 PKN1Q16512 942 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 SH3BP5LQ7L8J4 393 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 CATIPQ7Z7H3 387 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 SPATA32Q96LK8 384 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 STX8Q9UNK0 236 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 NID2Q14112 1375 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 SYCE3A1L190 88 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 DDTLA6NHG4 134 aaPredicted RBP27.99■■■□□ 2.07
SHISA5-201ENST00000296444 ADAMTS3O15072 1205 aa27.99■■■□□ 2.07
SHISA5-201ENST00000296444 ZSCAN16Q9H4T2 348 aaPredicted RBP27.99■■■□□ 2.07
SHISA5-201ENST00000296444 SCAF8Q9UPN6 1271 aaKnown RBP27.99■■■□□ 2.07
SHISA5-201ENST00000296444 V9GY48 417 aaPredicted RBP27.99■■■□□ 2.07
SHISA5-201ENST00000296444 LIG1P18858 919 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms