RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 A0A1W2PQ64 194 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 A0A1W2PQD8 194 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 RNF40O75150 1001 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 CCDC62Q6P9F0 684 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 RNF10Q8N5U6 811 aaKnown RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 PPANQ9NQ55 473 aaKnown RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 RRP15Q9Y3B9 282 aaKnown RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 PHLPP2Q6ZVD8 1323 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 LIG3P49916 1009 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 PPP2R5EQ16537 467 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 ARHGEF2Q92974 986 aaKnown RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 GDAP1L1Q96MZ0 367 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 PSMB7Q99436 277 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 MAP3K19Q56UN5 1328 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 ABCC2Q92887 1545 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 CUL4AQ13619 759 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 GKAP1Q5VSY0 366 aaPredicted RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 DENND2CQ68D51 928 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 PEX26Q7Z412 305 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 NBPF5PQ86XG9 351 aaPredicted RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 PLBD2Q8NHP8 589 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 CTNNA1P35221 906 aaKnown RBP12.26□□□□□ -0.45
PBRM1-201ENST00000296302 PHLDB2Q86SQ0 1253 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 NLRP3Q96P20 1036 aa12.26□□□□□ -0.45
PBRM1-201ENST00000296302 ZNF131P52739 623 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 CCDC14Q49A88 953 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 HHATQ5VTY9 493 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 HAUS3Q68CZ6 603 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 RAB3IL1Q8TBN0 382 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 PHKBQ93100 1093 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 EDC4Q6P2E9 1401 aaKnown RBP12.25□□□□□ -0.45
PBRM1-201ENST00000296302 KDM5DQ9BY66 1539 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 MYO1AQ9UBC5 1043 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 HOXC9P31274 260 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 PSMC4P43686 418 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 SH3BGRP55822 239 aaPredicted RBP12.25□□□□□ -0.45
PBRM1-201ENST00000296302 ZNF804AQ7Z570 1209 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.25□□□□□ -0.45
PBRM1-201ENST00000296302 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 ASIC3Q9UHC3 531 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 PCDHA7Q9UN72 937 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 FAM169AQ9Y6X4 670 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 KCNJ18B7U540 433 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 NDC80O14777 642 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 DNM2P50570 870 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 KCNJ12Q14500 433 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 MICAL1Q8TDZ2 1067 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 EXOC4Q96A65 974 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 SUCLG2Q96I99 432 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 OSBPL3Q9H4L5 887 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 RGS16O15492 202 aaPredicted RBP12.25□□□□□ -0.45
PBRM1-201ENST00000296302 PTH1RQ03431 593 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 TYW1BQ6NUM6 668 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 KRT25Q7Z3Z0 450 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 HELBQ8NG08 1087 aaPredicted RBP12.25□□□□□ -0.45
PBRM1-201ENST00000296302 STK24Q9Y6E0 443 aa12.25□□□□□ -0.45
PBRM1-201ENST00000296302 TNRQ92752 1358 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 LONRF2Q1L5Z9 754 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 CACTINQ8WUQ7 758 aaKnown RBP12.24□□□□□ -0.45
PBRM1-201ENST00000296302 RAB3IPQ96QF0 476 aaPredicted RBP12.24□□□□□ -0.45
PBRM1-201ENST00000296302 STAP2Q9UGK3 403 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 NRBP1Q9UHY1 535 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 FAM184BQ9ULE4 1060 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 UHRF1BP1LA0JNW5 1464 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 SPATA1Q5VX52 437 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 VPS52Q8N1B4 723 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 GLT8D2Q9H1C3 349 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 PTPRTO14522 1441 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 HIP1RO75146 1068 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 GCKP35557 465 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 RRAGAQ7L523 313 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 C2CD5Q86YS7 1000 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 MAIP1Q8WWC4 291 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
PBRM1-201ENST00000296302 FAM204AQ9H8W3 233 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 CTTNBP2NLQ9P2B4 639 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 ADGRL2O95490 1459 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 CCDC151A5D8V7 595 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 IKBKBO14920 756 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 DTNBO60941 627 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.45
PBRM1-201ENST00000296302 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 NOSTRINQ8IVI9 506 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 LRWD1Q9UFC0 647 aa12.24□□□□□ -0.45
PBRM1-201ENST00000296302 PABPN1LA6NDY0 278 aaKnown RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 CCNT1O60563 726 aaKnown RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 UAP1Q16222 522 aaPredicted RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 IP6K1Q92551 441 aa12.23□□□□□ -0.45
PBRM1-201ENST00000296302 DDX23Q9BUQ8 820 aaKnown RBP12.23□□□□□ -0.45
PBRM1-201ENST00000296302 SPTLC3Q9NUV7 552 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms