RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 OPHN1O60890 802 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 LONRF3Q496Y0 759 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 TRAIPQ9BWF2 469 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 ECHDC1Q9NTX5 307 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
SLX4-201ENST00000294008 DBN1Q16643 649 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 FAM102BQ5T8I3 360 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 SYTL2Q9HCH5 934 aa13.78□□□□□ -0.2
SLX4-201ENST00000294008 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.2
SLX4-201ENST00000294008 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.2
SLX4-201ENST00000294008 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.2
SLX4-201ENST00000294008 TMTC2Q8N394 836 aa13.77□□□□□ -0.2
SLX4-201ENST00000294008 HACD3Q9P035 362 aa13.77□□□□□ -0.2
SLX4-201ENST00000294008 BAZ1AQ9NRL2 1556 aaPredicted RBP13.77□□□□□ -0.2
SLX4-201ENST00000294008 HEXIM1O94992 359 aaKnown RBP13.77□□□□□ -0.2
SLX4-201ENST00000294008 CEBPAP49715 358 aaPredicted RBP13.77□□□□□ -0.2
SLX4-201ENST00000294008 RAPH1Q70E73 1250 aa13.77□□□□□ -0.2
SLX4-201ENST00000294008 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 PFDN6O15212 129 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 APOEP02649 317 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 SKILP12757 684 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 TXKP42681 527 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 DPY19L2Q6NUT2 758 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.77□□□□□ -0.21
SLX4-201ENST00000294008 P4HA1P13674 534 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 HINFPQ9BQA5 517 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
SLX4-201ENST00000294008 LGSNQ5TDP6 509 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 KRT12Q99456 494 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 RTL9Q8NET4 1388 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 PUM3Q15397 648 aaKnown RBP13.76□□□□□ -0.21
SLX4-201ENST00000294008 KLHL7Q8IXQ5 586 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 AFAP1L1Q8TED9 768 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 DDX17Q92841 729 aaKnown RBP13.76□□□□□ -0.21
SLX4-201ENST00000294008 TACO1Q9BSH4 297 aaKnown RBP13.76□□□□□ -0.21
SLX4-201ENST00000294008 H7C1D1 291 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 BMP15O95972 392 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 H0YIN7 160 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
SLX4-201ENST00000294008 PTPROQ16827 1216 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 DNAJC25Q9H1X3 360 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 GSTA4O15217 222 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 SNRPA1P09661 255 aaKnown RBP13.76□□□□□ -0.21
SLX4-201ENST00000294008 PDE4DQ08499 809 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 ANKRD13DQ6ZTN6 518 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 SUGCTQ9HAC7 445 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 PDCD2Q16342 344 aaPredicted RBP13.76□□□□□ -0.21
SLX4-201ENST00000294008 MIER3Q7Z3K6 550 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 FAM76AQ8TAV0 307 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
SLX4-201ENST00000294008 LRPPRCP42704 1394 aaKnown RBP13.75□□□□□ -0.21
SLX4-201ENST00000294008 PYGLP06737 847 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 CCDC105Q8IYK2 499 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 ZNF277Q9NRM2 450 aaPredicted RBP13.75□□□□□ -0.21
SLX4-201ENST00000294008 TEKT2Q9UIF3 430 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 PLEKHG3A1L390 1219 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 IFNB1P01574 187 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 C10orf67Q8IYJ2 551 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 LRGUKQ96M69 825 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 SESN3P58005 492 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 TSGA10Q9BZW7 698 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 FAM8A1Q9UBU6 413 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 SPAG1Q07617 926 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 PSMD2Q13200 908 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 NELFCDQ8IXH7 590 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 KAZNQ674X7 775 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 DYMQ7RTS9 669 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 FAM71BQ8TC56 605 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 USH1CQ9Y6N9 552 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 TRIM68Q6AZZ1 485 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 DEPTORQ8TB45 409 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 VPS16Q9H269 839 aa13.75□□□□□ -0.21
SLX4-201ENST00000294008 MRPL44Q9H9J2 332 aaKnown RBP13.75□□□□□ -0.21
SLX4-201ENST00000294008 ZNF18P17022 549 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 NBPF11Q86T75 865 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 STAM2O75886 525 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 CLNS1AP54105 237 aaKnown RBP13.74□□□□□ -0.21
SLX4-201ENST00000294008 RSRC2Q7L4I2 434 aaKnown RBP13.74□□□□□ -0.21
SLX4-201ENST00000294008 PRPF38AQ8NAV1 312 aaKnown RBP13.74□□□□□ -0.21
SLX4-201ENST00000294008 PPP1R16BQ96T49 567 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 GCNAQ96QF7 691 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 ESRRBO95718 433 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 PPP2R5EQ16537 467 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 CNBD1Q8NA66 436 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 XAGE3Q8WTP9 111 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 ACTN4O43707 911 aaKnown RBP13.74□□□□□ -0.21
SLX4-201ENST00000294008 EXOC3O60645 756 aa13.74□□□□□ -0.21
SLX4-201ENST00000294008 ANO4Q32M45 955 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms