RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 NT5DC1Q5TFE4 455 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 NCAPH2Q6IBW4 605 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 EPSTI1Q96J88 318 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 PANX2Q96RD6 677 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 IFIT3O14879 490 aaKnown RBP21.24■□□□□ 0.99
SSC4D-201ENST00000275560 ADD2P35612 726 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 LEKR1Q6ZMV7 388 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 PSD3Q9NYI0 1048 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 ZSWIM5Q9P217 1185 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 WWC3Q9ULE0 1092 aa21.24■□□□□ 0.99
SSC4D-201ENST00000275560 MMP1P03956 469 aa21.23■□□□□ 0.99
SSC4D-201ENST00000275560 SLC12A7Q9Y666 1083 aa21.23■□□□□ 0.99
SSC4D-201ENST00000275560 ZNF532Q9HCE3 1301 aa21.23■□□□□ 0.99
SSC4D-201ENST00000275560 LRRIQ3A6PVS8 624 aaPredicted RBP21.23■□□□□ 0.99
SSC4D-201ENST00000275560 CASP8Q14790 479 aa21.23■□□□□ 0.99
SSC4D-201ENST00000275560 RAB21Q9UL25 225 aa21.23■□□□□ 0.99
SSC4D-201ENST00000275560 AKAP2Q9Y2D5 859 aa21.23■□□□□ 0.99
SSC4D-201ENST00000275560 CTAGE9A4FU28 777 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 MFAP3LO75121 409 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 GYPCP04921 128 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 CEP112Q8N8E3 955 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 MSANTD4Q8NCY6 345 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 CABP5Q9NP86 173 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 TOMM22Q9NS69 142 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 TRIM10Q9UDY6 481 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 WDR19Q8NEZ3 1342 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 GDAP1L1Q96MZ0 367 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 DACH1Q9UI36 760 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 TFR2Q9UP52 801 aa21.22■□□□□ 0.99
SSC4D-201ENST00000275560 hCG_1642624A0A1W2PR95 340 aa21.21■□□□□ 0.99
SSC4D-201ENST00000275560 ERVK-24P63145 666 aa21.21■□□□□ 0.99
SSC4D-201ENST00000275560 DPYDQ12882 1025 aa21.21■□□□□ 0.99
SSC4D-201ENST00000275560 HNRNPLLQ8WVV9 542 aaKnown RBP21.21■□□□□ 0.99
SSC4D-201ENST00000275560 ADD3Q9UEY8 706 aaKnown RBP21.21■□□□□ 0.99
SSC4D-201ENST00000275560 SYNRGQ9UMZ2 1314 aa21.21■□□□□ 0.99
SSC4D-201ENST00000275560 USP5P45974 858 aa21.21■□□□□ 0.99
SSC4D-201ENST00000275560 METTL24Q5JXM2 366 aa21.21■□□□□ 0.99
SSC4D-201ENST00000275560 FMNL1O95466 1100 aaPredicted RBP21.2■□□□□ 0.98
SSC4D-201ENST00000275560 RASGRP2Q7LDG7 609 aa21.2■□□□□ 0.98
SSC4D-201ENST00000275560 SAFBQ15424 915 aaKnown RBP eCLIP21.2■□□□□ 0.98
SSC4D-201ENST00000275560 TICAM2Q86XR7 235 aa21.2■□□□□ 0.98
SSC4D-201ENST00000275560 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.2■□□□□ 0.98
SSC4D-201ENST00000275560 SLF1Q9BQI6 1058 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 MYH7P12883 1935 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 WNT7AO00755 349 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 PBX1P40424 430 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 EARS2Q5JPH6 523 aaKnown RBP21.19■□□□□ 0.98
SSC4D-201ENST00000275560 EPB41L4AQ9HCS5 686 aaPredicted RBP21.19■□□□□ 0.98
SSC4D-201ENST00000275560 ENC1O14682 589 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 ERLIN1O75477 346 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 SPATA1Q5VX52 437 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 NUP133Q8WUM0 1156 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 TMEM87BQ96K49 555 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 VPS16Q9H269 839 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 HDAC6Q9UBN7 1215 aa21.19■□□□□ 0.98
SSC4D-201ENST00000275560 GLI3P10071 1580 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 CTAGE15A4D2H0 777 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 CTAGE8P0CG41 777 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 CUL4BQ13620 913 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 CTAGE6Q86UF2 777 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 CTAGE4Q8IX94 777 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 HINFPQ9BQA5 517 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 PDE6AP16499 860 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 KIF1AQ12756 1690 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 RIN2Q8WYP3 895 aaPredicted RBP21.18■□□□□ 0.98
SSC4D-201ENST00000275560 SHISA4Q96DD7 197 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 NAPGQ99747 312 aaPredicted RBP21.18■□□□□ 0.98
SSC4D-201ENST00000275560 FAM204AQ9H8W3 233 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 CTNND2Q9UQB3 1225 aa21.18■□□□□ 0.98
SSC4D-201ENST00000275560 SRPRBQ9Y5M8 271 aaKnown RBP21.18■□□□□ 0.98
SSC4D-201ENST00000275560 ZMYND10O75800 440 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 EIF3JO75822 258 aaKnown RBP21.17■□□□□ 0.98
SSC4D-201ENST00000275560 PHKA1P46020 1223 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 IFIT5Q13325 482 aaKnown RBP21.17■□□□□ 0.98
SSC4D-201ENST00000275560 NOM1Q5C9Z4 860 aaKnown RBP21.17■□□□□ 0.98
SSC4D-201ENST00000275560 SGMS1Q86VZ5 419 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 SPATA20Q8TB22 786 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 TMEM94Q12767 1356 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 SNAP23O00161 211 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 PRKAB2O43741 272 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 ERCC5P28715 1186 aaPredicted RBP21.17■□□□□ 0.98
SSC4D-201ENST00000275560 ARHGAP25P42331 645 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 AKAP17AQ02040 695 aaKnown RBP21.17■□□□□ 0.98
SSC4D-201ENST00000275560 LRRC31Q6UY01 552 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 IQUBQ8NA54 791 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 AIDAQ96BJ3 306 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 BLZF1Q9H2G9 400 aa21.17■□□□□ 0.98
SSC4D-201ENST00000275560 AKAP11Q9UKA4 1901 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 IFNAR1P17181 557 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 NOP2P46087 812 aaKnown RBP21.16■□□□□ 0.98
SSC4D-201ENST00000275560 RILPL1Q5EBL4 403 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 LDHAL6AQ6ZMR3 332 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 HELBQ8NG08 1087 aaPredicted RBP21.16■□□□□ 0.98
SSC4D-201ENST00000275560 CDKAL1Q5VV42 579 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 TRIML1Q8N9V2 468 aa21.16■□□□□ 0.98
SSC4D-201ENST00000275560 PAGE5Q96GU1 130 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms