RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 CHAMP1Q96JM3 812 aa11.62□□□□□ -0.55
SEC22C-201ENST00000264454 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
SEC22C-201ENST00000264454 ZDHHC15Q96MV8 337 aa11.62□□□□□ -0.55
SEC22C-201ENST00000264454 RNF26Q9BY78 433 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-201ENST00000264454 PDGFDQ9GZP0 370 aaPredicted RBP11.62□□□□□ -0.55
SEC22C-201ENST00000264454 USP40Q9NVE5 1235 aa11.62□□□□□ -0.55
SEC22C-201ENST00000264454 SERPINA10Q9UK55 444 aa11.62□□□□□ -0.55
SEC22C-201ENST00000264454 MYO3BQ8WXR4 1341 aa11.62□□□□□ -0.55
SEC22C-201ENST00000264454 GOLGA6L4A6NEF3 574 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 PPIP5K2O43314 1243 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
SEC22C-201ENST00000264454 TSPY3P0CV98 308 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 TSPY8P0CW00 308 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 DPEP1P16444 411 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 XBP1P17861 261 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 RXRAP19793 462 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 KCNA3P22001 575 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 KIF5BP33176 963 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 CRKP46108 304 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 PLCD1P51178 756 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
SEC22C-201ENST00000264454 TROAPQ12815 778 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 AOC3Q16853 763 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 RAB11FIP4Q86YS3 637 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
SEC22C-201ENST00000264454 NUP133Q8WUM0 1156 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 MYL10Q9BUA6 226 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 SLC26A6Q9BXS9 759 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 KAT14Q9H8E8 782 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
SEC22C-201ENST00000264454 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
SEC22C-201ENST00000264454 SWAP70Q9UH65 585 aa11.61□□□□□ -0.55
SEC22C-201ENST00000264454 DLEC1Q9Y238 1755 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 FSD2A1L4K1 749 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
SEC22C-201ENST00000264454 SMIM22K7EJ46 135 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 CDK8P49336 464 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 GNAQP50148 359 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 SAFBQ15424 915 aaKnown RBP eCLIP11.6□□□□□ -0.55
SEC22C-201ENST00000264454 ZSCAN23Q3MJ62 389 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 FAM47AQ5JRC9 791 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
SEC22C-201ENST00000264454 CCDC144CPQ8IYA2 1237 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 LEO1Q8WVC0 666 aaPredicted RBP11.6□□□□□ -0.55
SEC22C-201ENST00000264454 SYT17Q9BSW7 474 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 DHX36Q9H2U1 1008 aaKnown RBP11.6□□□□□ -0.55
SEC22C-201ENST00000264454 SAP30BPQ9UHR5 308 aaKnown RBP11.6□□□□□ -0.55
SEC22C-201ENST00000264454 RCOR1Q9UKL0 485 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 NAV1Q8NEY1 1877 aa11.6□□□□□ -0.55
SEC22C-201ENST00000264454 PRPF3O43395 683 aaKnown RBP11.59□□□□□ -0.55
SEC22C-201ENST00000264454 GADD45BO75293 160 aaPredicted RBP11.59□□□□□ -0.55
SEC22C-201ENST00000264454 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 RASA1P20936 1047 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 PTGER2P43116 358 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 MRE11P49959 708 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 MMP14P50281 582 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 KRT40Q6A162 431 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 NBPF11Q86T75 865 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 PHKBQ93100 1093 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 DYNLL2Q96FJ2 89 aa11.59□□□□□ -0.55
SEC22C-201ENST00000264454 FHDC1Q9C0D6 1143 aaPredicted RBP11.59□□□□□ -0.55
SEC22C-201ENST00000264454 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
SEC22C-201ENST00000264454 KIF13BQ9NQT8 1826 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 WDHD1O75717 1129 aaPredicted RBP11.58□□□□□ -0.56
SEC22C-201ENST00000264454 ZBTB7AO95365 584 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 U2AF2P26368 475 aaKnown RBP eCLIP11.58□□□□□ -0.563e-6■■■■□ 23.8
SEC22C-201ENST00000264454 SCNN1DP51172 638 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 KIF23Q02241 960 aaPredicted RBP11.58□□□□□ -0.56
SEC22C-201ENST00000264454 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
SEC22C-201ENST00000264454 CCDC183Q5T5S1 534 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 RCSD1Q6JBY9 416 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 FAM173BQ6P4H8 233 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 LZTS2Q9BRK4 669 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 IDI2Q9BXS1 227 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 OSBPL5Q9H0X9 879 aaPredicted RBP11.58□□□□□ -0.56
SEC22C-201ENST00000264454 EHD4Q9H223 541 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 IL17RBQ9NRM6 502 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 RTEL1Q9NZ71 1219 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
SEC22C-201ENST00000264454 PPFIA3O75145 1194 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 YEATS4O95619 227 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 VIL1P09327 827 aaKnown RBP11.57□□□□□ -0.56
SEC22C-201ENST00000264454 NOVP48745 357 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 FOSBP53539 338 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 EVX2Q03828 476 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 GABPAQ06546 454 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 DALRD3Q5D0E6 543 aaKnown RBP11.57□□□□□ -0.56
SEC22C-201ENST00000264454 TMTC3Q6ZXV5 915 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 KIAA0825Q8IV33 1275 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 FAM177A1Q8N128 213 aaPredicted RBP11.57□□□□□ -0.56
SEC22C-201ENST00000264454 LARGE2Q8N3Y3 721 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 PNMA1Q8ND90 353 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 MXD3Q9BW11 206 aa11.57□□□□□ -0.56
SEC22C-201ENST00000264454 KCNQ5Q9NR82 932 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms