RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 LILRA6Q6PI73 481 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 VSIG10LQ86VR7 867 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 KIAA0825Q8IV33 1275 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 SMG8Q8ND04 991 aaKnown RBP3.33□□□□□ -1.88
ATF1-201ENST00000262053 FAM46AQ96IP4 442 aaKnown RBP3.33□□□□□ -1.88
ATF1-201ENST00000262053 MYRFLQ96LU7 910 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 NBPF4Q96M43 638 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 DPH2Q9BQC3 489 aaPredicted RBP3.33□□□□□ -1.88
ATF1-201ENST00000262053 SPON2Q9BUD6 331 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 MIR1-1HGQ9H1L0 117 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 SEMA6CQ9H3T2 930 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 CRIM1Q9NZV1 1036 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 CYP8B1Q9UNU6 501 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 HIF3AQ9Y2N7 669 aa3.33□□□□□ -1.88
ATF1-201ENST00000262053 MEGF11A6BM72 1044 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 GAS2O43903 313 aaKnown RBP3.32□□□□□ -1.88
ATF1-201ENST00000262053 TRIM37O94972 964 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 GARTP22102 1010 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 RXRBP28702 533 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 ASPAP45381 313 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 RPS26P62854 115 aaKnown RBP3.32□□□□□ -1.88
ATF1-201ENST00000262053 ID3Q02535 119 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 ANKRD34AQ69YU3 496 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 RELL1Q8IUW5 271 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 KSR1Q8IVT5 923 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 ZNF296Q8WUU4 475 aaPredicted RBP3.32□□□□□ -1.88
ATF1-201ENST00000262053 DHX38Q92620 1227 aaKnown RBP3.32□□□□□ -1.88
ATF1-201ENST00000262053 NT5C1AQ9BXI3 368 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 FBRSQ9HAH7 460 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 STRIP2Q9ULQ0 834 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 FAM221AA4D161 298 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 PRR19A6NJB7 356 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 GREM1O60565 184 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 PRNPP04156 253 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 HMGB1P09429 215 aaKnown RBP3.32□□□□□ -1.88
ATF1-201ENST00000262053 GTF2F1P35269 517 aaKnown RBP eCLIP3.32□□□□□ -1.88
ATF1-201ENST00000262053 SOX9P48436 509 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 CDK5R2Q13319 367 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 NKG7Q16617 165 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 SNAP47Q5SQN1 464 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.32□□□□□ -1.88
ATF1-201ENST00000262053 BEND4Q6ZU67 534 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 CLEC10AQ8IUN9 316 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 ELMO3Q96BJ8 720 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 DNAJC2Q99543 621 aaKnown RBP3.32□□□□□ -1.88
ATF1-201ENST00000262053 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.32□□□□□ -1.88
ATF1-201ENST00000262053 EMILIN2Q9BXX0 1053 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 KRT82Q9NSB4 513 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 SAMM50Q9Y512 469 aa3.32□□□□□ -1.88
ATF1-201ENST00000262053 SMARCA5O60264 1052 aaPredicted RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 RNGTTO60942 597 aaKnown RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 USP11P51784 963 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 LMNB2Q03252 620 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 LRRC14Q15048 493 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 GIMAP6Q6P9H5 292 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 CCDC84Q86UT8 332 aaPredicted RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 FAM20CQ8IXL6 584 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 FBXL6Q8N531 539 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 XAGE3Q8WTP9 111 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 ISL2Q96A47 359 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 EAF1Q96JC9 268 aaPredicted RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 TOX2Q96NM4 488 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 LRRC3Q9BY71 257 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 PICK1Q9NRD5 415 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 GFRA2O00451 464 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 DNAJA2O60884 412 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 STK10O94804 968 aaKnown RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 SLFN14P0C7P3 912 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 MAP4P27816 1152 aaKnown RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 ADMP35318 185 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 RING1Q06587 406 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 NFKBIBQ15653 356 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 CCDC144BQ3MJ40 725 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 SEZ6Q53EL9 994 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 SCARA3Q6AZY7 606 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 SIAH1Q8IUQ4 282 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 ZSCAN18Q8TBC5 510 aaPredicted RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 GATAD2BQ8WXI9 593 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 MFSD14AQ96MC6 490 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 C7orf69Q9H7B7 122 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 PIM2Q9P1W9 311 aa3.31□□□□□ -1.88
ATF1-201ENST00000262053 POLR3KQ9Y2Y1 108 aaPredicted RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 SUPT16HQ9Y5B9 1047 aaKnown RBP3.31□□□□□ -1.88
ATF1-201ENST00000262053 ROBO2Q9HCK4 1378 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 CILPO75339 1184 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 HSP90B1P14625 803 aaKnown RBP3.3□□□□□ -1.88
ATF1-201ENST00000262053 GRK4P32298 578 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 ETF1P62495 437 aaKnown RBP3.3□□□□□ -1.88
ATF1-201ENST00000262053 SERINC3Q13530 473 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 CCDC81Q6ZN84 652 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 FAM196AQ6ZSG2 479 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 SLITRK4Q8IW52 837 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 ACSS3Q9H6R3 686 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 ANTXR1Q9H6X2 564 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 PIDD1Q9HB75 910 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 BRMS1Q9HCU9 246 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 CECR2Q9BXF3 1484 aa3.3□□□□□ -1.88
ATF1-201ENST00000262053 FAM95CA0A1B0GW59 222 aa3.29□□□□□ -1.88
ATF1-201ENST00000262053 UPK3BL1B0FP48 263 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms