RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CLNS1AP54105 237 aaKnown RBP18.19■□□□□ 0.5
SREBF1-201ENST00000261646 MED14O60244 1454 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 A6NNZ2 444 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 TMEM232C9JQI7 657 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 COBLO75128 1261 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 TUBB8Q3ZCM7 444 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 EFCAB13Q8IY85 973 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 CSGALNACT2Q8N6G5 542 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 HAUS7Q99871 368 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 SELENOOQ9BVL4 669 aa18.19■□□□□ 0.5
SREBF1-201ENST00000261646 SAMSN1Q9NSI8 373 aaKnown RBP18.19■□□□□ 0.5
SREBF1-201ENST00000261646 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 SASH1O94885 1247 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 FGAP02671 866 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 KIAA0753Q2KHM9 967 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 MAGEB6Q8N7X4 407 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 UBLCP1Q8WVY7 318 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 EPN1Q9Y6I3 576 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 A0A087WUV0 522 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 ERCC3P19447 782 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 NOSTRINQ8IVI9 506 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 DHX40Q8IX18 779 aaKnown RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 XAGE2Q96GT9 111 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 SAMM50Q9Y512 469 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 MBD4O95243 580 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 CMTR1Q8N1G2 835 aaKnown RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 ACRBPQ8NEB7 543 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 RPGRIP1Q96KN7 1286 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 GPHNQ9NQX3 736 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-201ENST00000261646 QRICH2Q9H0J4 1663 aa18.18■□□□□ 0.5
SREBF1-201ENST00000261646 EIF3CLB5ME19 914 aaKnown RBP18.17■□□□□ 0.5
SREBF1-201ENST00000261646 MAGEA9P43362 315 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 TNNC1P63316 161 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 RBL2Q08999 1139 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 EIF3CQ99613 913 aaKnown RBP18.17■□□□□ 0.5
SREBF1-201ENST00000261646 PPANQ9NQ55 473 aaKnown RBP18.17■□□□□ 0.5
SREBF1-201ENST00000261646 STX8Q9UNK0 236 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 E7EVH7 732 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 TADA3O75528 432 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 ZAP70P43403 619 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 SPATA1Q5VX52 437 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 DTHD1Q6ZMT9 781 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 GRAMD1CQ8IYS0 662 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 NELFBQ8WX92 580 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 RSRC1Q96IZ7 334 aaKnown RBP18.17■□□□□ 0.5
SREBF1-201ENST00000261646 TSGA10Q9BZW7 698 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 KAT14Q9H8E8 782 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
SREBF1-201ENST00000261646 MAGEA1P43355 309 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 KCTD16Q68DU8 428 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 IFT20Q8IY31 132 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 ZNF444Q8N0Y2 327 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-201ENST00000261646 EEF2KMTQ96G04 330 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 HAUS4Q9H6D7 363 aa18.17■□□□□ 0.5
SREBF1-201ENST00000261646 BICDL2A1A5D9 508 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 UBE4AQ14139 1066 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 FMR1NBQ8N0W7 255 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-201ENST00000261646 PNMA8AQ86V59 439 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-201ENST00000261646 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 ADGRB3O60242 1522 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 HSPA2P54652 639 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 IFI16Q16666 785 aaKnown RBP18.16■□□□□ 0.5
SREBF1-201ENST00000261646 TOGARAM2Q6ZUX3 1019 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 CCDC155Q8N6L0 562 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 AIFM3Q96NN9 605 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-201ENST00000261646 PPP1R12BO60237 982 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-201ENST00000261646 PLCD1P51178 756 aa18.16■□□□□ 0.5
SREBF1-201ENST00000261646 KIF23Q02241 960 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-201ENST00000261646 CEP152O94986 1710 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 TTLL7Q6ZT98 887 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 FUCA2Q9BTY2 467 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 TAOK3Q9H2K8 898 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 SMYD4Q8IYR2 804 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-201ENST00000261646 FEZ2Q9UHY8 353 aaPredicted RBP18.15■□□□□ 0.5
SREBF1-201ENST00000261646 PPFIA4O75335 1185 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 SSR1P43307 286 aaKnown RBP18.15■□□□□ 0.5
SREBF1-201ENST00000261646 GUCY2FP51841 1108 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 NCAPH2Q6IBW4 605 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 PIK3AP1Q6ZUJ8 805 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 HEATR3Q7Z4Q2 680 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 WDR24Q96S15 920 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 CFAP74Q9C0B2 1584 aa18.15■□□□□ 0.5
SREBF1-201ENST00000261646 CEP85LQ5SZL2 805 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 NYAP1Q6ZVC0 841 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 KLHL7Q8IXQ5 586 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 TRIML1Q8N9V2 468 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 BAIAP2L1Q9UHR4 511 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 TTC38Q5R3I4 469 aa18.14■□□□□ 0.49
SREBF1-201ENST00000261646 CTNNBL1Q8WYA6 563 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-201ENST00000261646 VPS54Q9P1Q0 977 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms