RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PPP2R3AQ06190 1150 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 RRAGBQ5VZM2 374 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 ADGRA1Q86SQ6 560 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 SYMPKQ92797 1274 aaKnown RBP15.39■□□□□ 0.05
VHL-201ENST00000256474 CNNM2Q9H8M5 875 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 HPSEQ9Y251 543 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 CHD2O14647 1828 aaKnown RBP15.39■□□□□ 0.05
VHL-201ENST00000256474 RHOXF2BP0C7M4 288 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 CYP19A1P11511 503 aaPredicted RBP15.39■□□□□ 0.05
VHL-201ENST00000256474 RILPL1Q5EBL4 403 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 ZNF569Q5MCW4 686 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 CRACR2BQ8N4Y2 399 aaPredicted RBP15.39■□□□□ 0.05
VHL-201ENST00000256474 RASGRP4Q8TDF6 673 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 RHOXF2Q9BQY4 288 aa15.39■□□□□ 0.05
VHL-201ENST00000256474 WNT7AO00755 349 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 CCP110O43303 1012 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 IFNAR1P17181 557 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 CHRNDQ07001 517 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 N4BP2Q86UW6 1770 aaPredicted RBP15.38■□□□□ 0.05
VHL-201ENST00000256474 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 N4BP3O15049 544 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 ARHGAP6O43182 974 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 UTP14CQ5TAP6 766 aaKnown RBP15.38■□□□□ 0.05
VHL-201ENST00000256474 CATIPQ7Z7H3 387 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 ESR2Q92731 530 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 PCMTD1Q96MG8 357 aaPredicted RBP15.38■□□□□ 0.05
VHL-201ENST00000256474 NUP88Q99567 741 aaPredicted RBP15.38■□□□□ 0.05
VHL-201ENST00000256474 AATFQ9NY61 560 aaKnown RBP eCLIP15.38■□□□□ 0.05
VHL-201ENST00000256474 FBXO2Q9UK22 296 aaPredicted RBP15.38■□□□□ 0.05
VHL-201ENST00000256474 FANCGO15287 622 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 NEK11Q8NG66 645 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 BPIFA3Q9BQP9 254 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 TAB2Q9NYJ8 693 aa15.38■□□□□ 0.05
VHL-201ENST00000256474 MORC2Q9Y6X9 1032 aaPredicted RBP15.38■□□□□ 0.05
VHL-201ENST00000256474 SOS2Q07890 1332 aaPredicted RBP15.37■□□□□ 0.05
VHL-201ENST00000256474 MRC1P22897 1456 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 USP17L21D6R901 530 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 RBL2Q08999 1139 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 TERF2Q15554 542 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 REXO1L1PQ8IX06 675 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 DACH1Q9UI36 760 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 RIC1Q4ADV7 1423 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 PHACTR2O75167 634 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 PNMA6AP0CW24 399 aaPredicted RBP15.37■□□□□ 0.05
VHL-201ENST00000256474 TIGD1Q96MW7 591 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 TCRBV5S4A2TA0A5A2 114 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 IQCA1Q86XH1 822 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 ACRBPQ8NEB7 543 aa15.37■□□□□ 0.05
VHL-201ENST00000256474 MRPL44Q9H9J2 332 aaKnown RBP15.37■□□□□ 0.05
VHL-201ENST00000256474 A0A087X0B3 334 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 SLFN14P0C7P3 912 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 PTPREP23469 700 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 FILIP1LQ4L180 1135 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 BRMS1Q9HCU9 246 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 CEP131Q9UPN4 1083 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 ZNF335Q9H4Z2 1342 aaPredicted RBP15.36■□□□□ 0.05
VHL-201ENST00000256474 SYNRGQ9UMZ2 1314 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 AKR1B15C9JRZ8 316 aaPredicted RBP15.36■□□□□ 0.05
VHL-201ENST00000256474 VEGFAP15692 232 aaPredicted RBP15.36■□□□□ 0.05
VHL-201ENST00000256474 CASP14P31944 242 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 TRIM28Q13263 835 aaKnown RBP15.36■□□□□ 0.05
VHL-201ENST00000256474 SYCP1Q15431 976 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 CCDC152Q4G0S7 254 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 WWC2Q6AWC2 1192 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
VHL-201ENST00000256474 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
VHL-201ENST00000256474 TPM1P09493 284 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 KRT2P35908 639 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 PTGDRQ13258 359 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 TRIM65Q6PJ69 517 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 TC2NQ8N9U0 490 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 UIMC1Q96RL1 719 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
VHL-201ENST00000256474 CYP2D6P10635 497 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
VHL-201ENST00000256474 LIFRP42702 1097 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 SGMS1Q86VZ5 419 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 MLKLQ8NB16 471 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 CDC5LQ99459 802 aaKnown RBP15.35■□□□□ 0.05
VHL-201ENST00000256474 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 TSPY2A6NKD2 308 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 KIF20AO95235 890 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 GDAP1L1Q96MZ0 367 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 TFR2Q9UP52 801 aa15.35■□□□□ 0.05
VHL-201ENST00000256474 TULP1O00294 542 aaPredicted RBP15.34■□□□□ 0.05
VHL-201ENST00000256474 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
VHL-201ENST00000256474 PARP3Q9Y6F1 533 aa15.34■□□□□ 0.05
VHL-201ENST00000256474 MROH5Q6ZUA9 1318 aa15.34■□□□□ 0.05
VHL-201ENST00000256474 CCDC175P0C221 793 aa15.34■□□□□ 0.05
VHL-201ENST00000256474 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
VHL-201ENST00000256474 CAMTA1Q9Y6Y1 1673 aa15.34■□□□□ 0.05
VHL-201ENST00000256474 ENAHQ8N8S7 591 aaPredicted RBP15.34■□□□□ 0.05
VHL-201ENST00000256474 CPVLQ9H3G5 476 aa15.34■□□□□ 0.05
VHL-201ENST00000256474 VAT1LQ9HCJ6 419 aa15.34■□□□□ 0.05
VHL-201ENST00000256474 KIF5CO60282 957 aa15.33■□□□□ 0.05
VHL-201ENST00000256474 ARID4AP29374 1257 aaPredicted RBP15.33■□□□□ 0.05
VHL-201ENST00000256474 L2HGDHQ9H9P8 463 aa15.33■□□□□ 0.05
VHL-201ENST00000256474 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms