RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 C16orf86Q6ZW13 317 aa15.16■□□□□ 0.02
HIF3A-201ENST00000244302 IDI2Q9BXS1 227 aa15.16■□□□□ 0.02
HIF3A-201ENST00000244302 RNF181Q9P0P0 153 aa15.16■□□□□ 0.02
HIF3A-201ENST00000244302 CIZ1Q9ULV3 898 aaPredicted RBP15.16■□□□□ 0.02
HIF3A-201ENST00000244302 SMC3Q9UQE7 1217 aa15.16■□□□□ 0.02
HIF3A-201ENST00000244302 MYO3BQ8WXR4 1341 aa15.16■□□□□ 0.02
HIF3A-201ENST00000244302 NAV1Q8NEY1 1877 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 DDX11L8A8MPP1 907 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 EPS15P42566 896 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 DLK2Q6UY11 383 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 ZNF274Q96GC6 653 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-201ENST00000244302 TMEM87BQ96K49 555 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.15■□□□□ 0.02
HIF3A-201ENST00000244302 TMEM39BQ9GZU3 492 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 GJB4Q9NTQ9 266 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 MTMR7Q9Y216 660 aa15.15■□□□□ 0.02
HIF3A-201ENST00000244302 AKR1B1P15121 316 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 JAG1P78504 1218 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 RRP1BQ14684 758 aaKnown RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 GPR162Q16538 588 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 NSUN7Q8NE18 718 aaKnown RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 NUP133Q8WUM0 1156 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 TNPO1Q92973 898 aaKnown RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 WDR19Q8NEZ3 1342 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 SHMT1P34896 483 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 PRAMEF18Q5VWM3 479 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 CERS3Q8IU89 383 aa15.14■□□□□ 0.01
HIF3A-201ENST00000244302 ZNF444Q8N0Y2 327 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 ISY1Q9ULR0 285 aaKnown RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 DDX60LQ5H9U9 1706 aaKnown RBP15.14■□□□□ 0.01
HIF3A-201ENST00000244302 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 ROBO3Q96MS0 1386 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 FDPSP14324 419 aaKnown RBP15.13■□□□□ 0.01
HIF3A-201ENST00000244302 SYT1P21579 422 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 LIFRP42702 1097 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 SGMS1Q86VZ5 419 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 TRPM4Q8TD43 1214 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 PHKBQ93100 1093 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 FSD2A1L4K1 749 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 CCDC69A6NI79 296 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 TSPY3P0CV98 308 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 TSPY8P0CW00 308 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 PTMSP20962 102 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 ZNF280AP59817 542 aaPredicted RBP15.13■□□□□ 0.01
HIF3A-201ENST00000244302 RAB3GAP1Q15042 981 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 TTC6Q86TZ1 520 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 AIFM3Q96NN9 605 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 CWC22Q9HCG8 908 aaKnown RBP15.13■□□□□ 0.01
HIF3A-201ENST00000244302 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.13■□□□□ 0.01
HIF3A-201ENST00000244302 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
HIF3A-201ENST00000244302 SBF1O95248 1867 aa15.12■□□□□ 0.01
HIF3A-201ENST00000244302 PTPDC1A2A3K4 754 aa15.12■□□□□ 0.01
HIF3A-201ENST00000244302 ZBTB43O43298 467 aa15.12■□□□□ 0.01
HIF3A-201ENST00000244302 HIRAP54198 1017 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-201ENST00000244302 IFIT1BQ5T764 474 aaKnown RBP15.12■□□□□ 0.01
HIF3A-201ENST00000244302 OTUD7BQ6GQQ9 843 aa15.12■□□□□ 0.01
HIF3A-201ENST00000244302 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
HIF3A-201ENST00000244302 LAMB1P07942 1786 aa15.12■□□□□ 0.01
HIF3A-201ENST00000244302 FOCADQ5VW36 1801 aa15.12■□□□□ 0.01
HIF3A-201ENST00000244302 hCG_1642624A0A1W2PR95 340 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 METAP2P50579 478 aaKnown RBP eCLIP15.11■□□□□ 0.01
HIF3A-201ENST00000244302 IQCA1Q86XH1 822 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 ZNF654Q8IZM8 581 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 CEP95Q96GE4 821 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 STX8Q9UNK0 236 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 FZD1Q9UP38 647 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 ECM29Q5VYK3 1845 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 ERICH2A1L162 156 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 GDF11O95390 407 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 CSRNP1Q96S65 589 aa15.11■□□□□ 0.01
HIF3A-201ENST00000244302 BAZ2BQ9UIF8 2168 aaKnown RBP15.11■□□□□ 0.01
HIF3A-201ENST00000244302 GOLGA8AA7E2F4 631 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 GUCY1B3Q02153 619 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 TROAPQ12815 778 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 SART3Q15020 963 aaKnown RBP15.1■□□□□ 0.01
HIF3A-201ENST00000244302 NTRK3Q16288 839 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 SMARCC2Q8TAQ2 1214 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 PI4KBQ9UBF8 816 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 PCP11498 1178 aaKnown RBP15.1■□□□□ 0.01
HIF3A-201ENST00000244302 GUCY1A2P33402 732 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 DPF2Q92785 391 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 CPVLQ9H3G5 476 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 GPRC5DQ9NZD1 345 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 PGAP2Q9UHJ9 254 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 HACL1Q9UJ83 578 aa15.1■□□□□ 0.01
HIF3A-201ENST00000244302 SIPA1L1O43166 1804 aa15.09■□□□□ 0.01
HIF3A-201ENST00000244302 MPHOSPH10O00566 681 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms