RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 TROVE2P10155 538 aaKnown RBP eCLIP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 PHBP35232 272 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 AKNAD1Q5T1N1 836 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 EIF4G3O43432 1585 aaKnown RBP7.47□□□□□ -1.21
CSMD2-201ENST00000241312 STRN3Q13033 797 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 ZBTB17Q13105 803 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 COPS6Q7L5N1 327 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 HAUS8Q9BT25 410 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 PLCH2O75038 1416 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 PICALMQ13492 652 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 GSDMBQ8TAX9 411 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 DDX27Q96GQ7 796 aaKnown RBP7.47□□□□□ -1.21
CSMD2-201ENST00000241312 NLRP3Q96P20 1036 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 TRIM31Q9BZY9 425 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 TRIM4Q9C037 500 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 ZNF202O95125 648 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 KRT15P19012 456 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 STX2P32856 288 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 HVCN1Q96D96 273 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 CEP104O60308 925 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 PRR16Q569H4 304 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 LMBR1LQ6UX01 489 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 WWC3Q9ULE0 1092 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 TRPM2O94759 1503 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 SAR1BQ9Y6B6 198 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 PSMD6Q15008 389 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 HOMER3Q9NSC5 361 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 RBM26Q5T8P6 1007 aaKnown RBP7.47□□□□□ -1.21
CSMD2-201ENST00000241312 VTI1AQ96AJ9 217 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 PA2G4Q9UQ80 394 aaKnown RBP7.47□□□□□ -1.21
CSMD2-201ENST00000241312 ZSCAN26Q16670 478 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 MYCBPQ99417 103 aaPredicted RBP7.47□□□□□ -1.21
CSMD2-201ENST00000241312 ZBTB40Q9NUA8 1239 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 UGGT2Q9NYU1 1516 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 GCC2Q8IWJ2 1684 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 SYCP2Q9BX26 1530 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 CTNNA1P35221 906 aaKnown RBP7.47□□□□□ -1.21
CSMD2-201ENST00000241312 CASC4Q6P4E1 433 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 PLB1Q6P1J6 1458 aa7.47□□□□□ -1.21
CSMD2-201ENST00000241312 KRT25Q7Z3Z0 450 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 MAIP1Q8WWC4 291 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 NGLY1Q96IV0 654 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 NLRP12P59046 1061 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 GABPAQ06546 454 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 DENND4BO75064 1496 aaPredicted RBP7.46□□□□□ -1.21
CSMD2-201ENST00000241312 LETM2Q2VYF4 491 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 TTC38Q5R3I4 469 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 KRT12Q99456 494 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 KRT9P35527 623 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 ATP6V1AP38606 617 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 MICAL1Q8TDZ2 1067 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 NELFBQ8WX92 580 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 VPS37BQ9H9H4 285 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 LARSQ9P2J5 1176 aaKnown RBP7.46□□□□□ -1.21
CSMD2-201ENST00000241312 THEGQ9P2T0 379 aa7.46□□□□□ -1.21
CSMD2-201ENST00000241312 POLR2DO15514 142 aaKnown RBP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 RLBP1P12271 317 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 SLC12A2P55011 1212 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 PUM3Q15397 648 aaKnown RBP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 ZNF174Q15697 407 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 ZNF622Q969S3 477 aaKnown RBP eCLIP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 SND1Q7KZF4 910 aaKnown RBP eCLIP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 ARHGEF35A5YM69 484 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 CHMP2AO43633 222 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 GCKP35557 465 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 COG7P83436 770 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 TFCP2Q12800 502 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 REXO1Q8N1G1 1221 aaKnown RBP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 TSC1Q92574 1164 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 CBX8Q9HC52 389 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 PDE4DQ08499 809 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 DBN1Q16643 649 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 MIGA1Q8NAN2 632 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 STAG1Q8WVM7 1258 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 VEZTQ9HBM0 779 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 ZMYM3Q14202 1370 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 TBC1D8O95759 1140 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 GNA14O95837 355 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 BRDTQ58F21 947 aaPredicted RBP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 TRIM6Q9C030 488 aaPredicted RBP7.46□□□□□ -1.22
CSMD2-201ENST00000241312 TMOD4Q9NZQ9 345 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 WDR7Q9Y4E6 1490 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 GOLGA8KD6RF30 607 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 TRIM37O94972 964 aa7.46□□□□□ -1.22
CSMD2-201ENST00000241312 TXNDC9O14530 226 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 DAPK3O43293 454 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 MBD4O95243 580 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 PDE1CQ14123 709 aaPredicted RBP7.45□□□□□ -1.22
CSMD2-201ENST00000241312 AKAP4Q5JQC9 854 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 RIPOR2Q9Y4F9 1068 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 SHANK2Q9UPX8 1470 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 NPATQ14207 1427 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 ACEP12821 1306 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 PCDH11XQ9BZA7 1347 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 PCDH11YQ9BZA8 1340 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 ARHGAP42A6NI28 874 aa7.45□□□□□ -1.22
CSMD2-201ENST00000241312 DKC1O60832 514 aaKnown RBP eCLIP7.45□□□□□ -1.22
CSMD2-201ENST00000241312 DNAJC8O75937 253 aaPredicted RBP7.45□□□□□ -1.22
CSMD2-201ENST00000241312 P4HA1P13674 534 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms