RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 HCLS1P14317 486 aaPredicted RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 AMPD3Q01432 767 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 PTPN12Q05209 780 aaKnown RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 CBLBQ13191 982 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 TSGA10IPQ3SY00 556 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 ICE2Q659A1 982 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 CEP85Q6P2H3 762 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 USP17L2Q6R6M4 530 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 USP17L1Q7RTZ2 530 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 UBE3BQ7Z3V4 1068 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 ZNF513Q8N8E2 541 aaPredicted RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 CNKSR1Q969H4 720 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 RBM17Q96I25 401 aaKnown RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 OSBPL2Q9H1P3 480 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 PIM2Q9P1W9 311 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 PDS5AQ29RF7 1337 aaKnown RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 SALL3Q9BXA9 1300 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 PPEF1O14829 653 aaPredicted RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 FKBP4Q02790 459 aaKnown RBP eCLIP4.31□□□□□ -1.72
UFM1-201ENST00000239878 NEXNQ0ZGT2 675 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 HS1BP3Q53T59 392 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 C11orf96Q7Z7L8 435 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 RGL4Q8IZJ4 473 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 TTLL6Q8N841 843 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 TMC2Q8TDI7 906 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 TNPO1Q92973 898 aaKnown RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 METTL5Q9NRN9 209 aaKnown RBP4.31□□□□□ -1.72
UFM1-201ENST00000239878 DONSONQ9NYP3 566 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 OGFRQ9NZT2 677 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 DCTN4Q9UJW0 460 aa4.31□□□□□ -1.72
UFM1-201ENST00000239878 MYH13Q9UKX3 1938 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 TTC36A6NLP5 189 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 H0YIN7 160 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 FZD9O00144 591 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 VIL1P09327 827 aaKnown RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 GUCY2CP25092 1073 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 NBPF9Q3BBW0 867 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 CCDC152Q4G0S7 254 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 DALRD3Q5D0E6 543 aaKnown RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 SOGA3Q5TF21 947 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 BICDL1Q6ZP65 573 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 LRRN4Q8WUT4 740 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 SEC31BQ9NQW1 1179 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 RFX7Q2KHR2 1363 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 OATP04181 439 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 HOXB1P14653 301 aaPredicted RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 ALDH1B1P30837 517 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 HNRNPH2P55795 449 aaKnown RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 GPSM2P81274 684 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 ZNF211Q13398 564 aaPredicted RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 SERINC3Q13530 473 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 SART3Q15020 963 aaKnown RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 MCF2L2Q86YR7 1114 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 PANK1Q8TE04 598 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 CRBNQ96SW2 442 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 TMEM106CQ9BVX2 250 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 GNL3LQ9NVN8 582 aaKnown RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 SUFUQ9UMX1 484 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 MINPP1Q9UNW1 487 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 PNMA6EA0A0J9YXQ4 647 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 H3BRB1 525 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 GNAI3P08754 354 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 ITGA6P23229 1130 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 MAPK1P28482 360 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 ATP8B2P98198 1209 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 EAPPQ56P03 285 aaPredicted RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 OLFM4Q6UX06 510 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 CCDC24Q8N4L8 307 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 FAM174AQ8TBP5 190 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 ANKRD7Q92527 254 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 NLRP3Q96P20 1036 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 TUT1Q9H6E5 874 aaKnown RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 UPF2Q9HAU5 1272 aaKnown RBP4.3□□□□□ -1.72
UFM1-201ENST00000239878 CAPN10Q9HC96 672 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 POLLQ9UGP5 575 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 PNMA2Q9UL42 364 aa4.3□□□□□ -1.72
UFM1-201ENST00000239878 CDK5RAP2Q96SN8 1893 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 SIPA1L1O43166 1804 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 FGRP09769 529 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 IL1R1P14778 569 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 FKBP1AP62942 108 aaKnown RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 HMGN5P82970 282 aaKnown RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 FMR1Q06787 632 aaKnown RBP eCLIP4.29□□□□□ -1.72
UFM1-201ENST00000239878 KIAA2012Q0VF49 1180 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 HDAC1Q13547 482 aaPredicted RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 RTKN2Q8IZC4 609 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 PDLIM2Q96JY6 352 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 FEZ1Q99689 392 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 NOL10Q9BSC4 688 aaKnown RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 GPR108Q9NPR9 543 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 LRRFIP2Q9Y608 721 aaKnown RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 POTECB2RU33 542 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 IGHA2P01877 340 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 TDO2P48775 406 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 RPS8P62241 208 aaKnown RBP4.29□□□□□ -1.72
UFM1-201ENST00000239878 BIRC2Q13490 618 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 CCDC93Q567U6 631 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 ZFYVE27Q5T4F4 411 aa4.29□□□□□ -1.72
UFM1-201ENST00000239878 LMBR1LQ6UX01 489 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms