RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ENC1O14682 589 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 INPP5BP32019 993 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 VSNL1P62760 191 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 NCAPH2Q6IBW4 605 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 CAPN7Q9Y6W3 813 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 RNF40O75150 1001 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 SAFBQ15424 915 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 CABLES1Q8TDN4 633 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 KAT2BQ92831 832 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 ANKZF1Q9H8Y5 726 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 HPSEQ9Y251 543 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 SAMM50Q9Y512 469 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 IFIT3O14879 490 aaKnown RBP16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 TATP17735 454 aaPredicted RBP16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 APOA5Q6Q788 366 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 DIS3L2Q8IYB7 885 aaKnown RBP16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 RIN2Q8WYP3 895 aaPredicted RBP16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 FAM89AQ96GI7 184 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 CAPZA3Q96KX2 299 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 VPS16Q9H269 839 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 TFR2Q9UP52 801 aa16.03■□□□□ 0.16
PCDHB3-201ENST00000231130 DIP2AQ14689 1571 aa16.02■□□□□ 0.16
PCDHB3-201ENST00000231130 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.16
PCDHB3-201ENST00000231130 FKBP15Q5T1M5 1219 aa16.02■□□□□ 0.16
PCDHB3-201ENST00000231130 SLF1Q9BQI6 1058 aa16.02■□□□□ 0.16
PCDHB3-201ENST00000231130 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.16
PCDHB3-201ENST00000231130 KIF1CO43896 1103 aaKnown RBP16.02■□□□□ 0.15
PCDHB3-201ENST00000231130 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.15
PCDHB3-201ENST00000231130 SYNE4Q8N205 404 aa16.02■□□□□ 0.15
PCDHB3-201ENST00000231130 GUCA1BQ9UMX6 200 aa16.02■□□□□ 0.15
PCDHB3-201ENST00000231130 FAM169AQ9Y6X4 670 aa16.02■□□□□ 0.15
PCDHB3-201ENST00000231130 CTAGE9A4FU28 777 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 BIRC2Q13490 618 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 SWT1Q5T5J6 900 aaKnown RBP16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 FAM107BQ9H098 131 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 CABP5Q9NP86 173 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 ADGRG1Q9Y653 693 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 SLC12A7Q9Y666 1083 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 RANBP6O60518 1105 aaKnown RBP16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 CDKL5O76039 1030 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 SSRP1Q08945 709 aaKnown RBP16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 FCHSD1Q86WN1 690 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 CEP57Q86XR8 500 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 GPIHBP1Q8IV16 184 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 THEMISQ8N1K5 641 aaPredicted RBP16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 NOA1Q8NC60 698 aaKnown RBP16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 FAM71BQ8TC56 605 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 CDC23Q9UJX2 597 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 MAP2K7O14733 419 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 PPP6R2O75170 966 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 MAP3K14Q99558 947 aa16.01■□□□□ 0.15
PCDHB3-201ENST00000231130 CTAGE15A4D2H0 777 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 EXOC5O00471 708 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 CTAGE8P0CG41 777 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 CTAGE6Q86UF2 777 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 CTAGE4Q8IX94 777 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
PCDHB3-201ENST00000231130 APPBP2Q92624 585 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 MED15Q96RN5 788 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 KIAA0754O94854 1291 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 NF2P35240 595 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 PDE6BP35913 854 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 EPSTI1Q96J88 318 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 MED4Q9NPJ6 270 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 TRIM10Q9UDY6 481 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 GSCP56915 257 aaPredicted RBP16■□□□□ 0.15
PCDHB3-201ENST00000231130 TBX2Q13207 712 aaPredicted RBP16■□□□□ 0.15
PCDHB3-201ENST00000231130 METTL24Q5JXM2 366 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 BCAS4Q8TDM0 211 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 ZMYM6O95789 1325 aa16■□□□□ 0.15
PCDHB3-201ENST00000231130 SHTN1A0MZ66 631 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 FAM205CA6NFA0 338 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 PHKG2P15735 406 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 MRPS25P82663 173 aaKnown RBP15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 PPARDQ03181 441 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 GSPT2Q8IYD1 628 aaKnown RBP15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 OXER1Q8TDS5 423 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 N4BP2L2Q92802 583 aaPredicted RBP15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 BLZF1Q9H2G9 400 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 HEG1Q9ULI3 1381 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 UBN2Q6ZU65 1347 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 N4BP3O15049 544 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 NOSTRINQ8IVI9 506 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 CEP112Q8N8E3 955 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 CSRNP2Q9H175 543 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 HDAC6Q9UBN7 1215 aa15.99■□□□□ 0.15
PCDHB3-201ENST00000231130 SRGAP2O75044 1071 aa15.98■□□□□ 0.15
PCDHB3-201ENST00000231130 GPTP24298 496 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms