RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ABHD8Q96I13 439 aa28.12■■■□□ 2.09
HOMER3-201ENST00000221222 CA12O43570 354 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 MAP4K1Q92918 833 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 ZKSCAN4Q969J2 545 aaPredicted RBP28.11■■■□□ 2.09
HOMER3-201ENST00000221222 CLMNQ96JQ2 1002 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 LSG1Q9H089 658 aaKnown RBP28.11■■■□□ 2.09
HOMER3-201ENST00000221222 CTNNA3Q9UI47 895 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 CSADQ9Y600 493 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 CAP2P40123 477 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 CDK8P49336 464 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 KIF23Q02241 960 aaPredicted RBP28.11■■■□□ 2.09
HOMER3-201ENST00000221222 RRP1BQ14684 758 aaKnown RBP28.11■■■□□ 2.09
HOMER3-201ENST00000221222 SLC44A5Q8NCS7 719 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 CCDC102AQ96A19 550 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 SNCAIPQ9Y6H5 919 aa28.11■■■□□ 2.09
HOMER3-201ENST00000221222 SLC3A2P08195 630 aaKnown RBP28.1■■■□□ 2.09
HOMER3-201ENST00000221222 SCYL3Q8IZE3 742 aa28.1■■■□□ 2.09
HOMER3-201ENST00000221222 SLC10A4Q96EP9 437 aa28.09■■■□□ 2.09
HOMER3-201ENST00000221222 ANO2Q9NQ90 1003 aa28.09■■■□□ 2.09
HOMER3-201ENST00000221222 GINM1Q9NU53 330 aa28.09■■■□□ 2.09
HOMER3-201ENST00000221222 U3KPZ7 1027 aaPredicted RBP28.09■■■□□ 2.09
HOMER3-201ENST00000221222 SLC10A3P09131 477 aa28.08■■■□□ 2.09
HOMER3-201ENST00000221222 ZNF287Q9HBT7 754 aa28.08■■■□□ 2.09
HOMER3-201ENST00000221222 CERKLQ49MI3 558 aaPredicted RBP28.07■■■□□ 2.08
HOMER3-201ENST00000221222 ELP3Q9H9T3 547 aa28.07■■■□□ 2.08
HOMER3-201ENST00000221222 PHIPQ8WWQ0 1821 aa28.06■■■□□ 2.08
HOMER3-201ENST00000221222 ZNF213O14771 459 aa28.06■■■□□ 2.08
HOMER3-201ENST00000221222 FGRP09769 529 aa28.06■■■□□ 2.08
HOMER3-201ENST00000221222 CTDSPL2Q05D32 466 aa28.06■■■□□ 2.08
HOMER3-201ENST00000221222 PDE4BQ07343 736 aa28.06■■■□□ 2.08
HOMER3-201ENST00000221222 IMMTQ16891 758 aaKnown RBP28.06■■■□□ 2.08
HOMER3-201ENST00000221222 RASAL3Q86YV0 1011 aa28.06■■■□□ 2.08
HOMER3-201ENST00000221222 NBPF3Q9H094 633 aa28.06■■■□□ 2.08
HOMER3-201ENST00000221222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.06■■■□□ 2.08
HOMER3-201ENST00000221222 SPDYE5A6NIY4 337 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 GDF11O95390 407 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 ASNSP08243 561 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 HAND2P61296 217 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 JAG1P78504 1218 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 ERO1BQ86YB8 467 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 STK11IPQ8N1F8 1099 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 CCDC17Q96LX7 622 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 MKNK2Q9HBH9 465 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 PICK1Q9NRD5 415 aa28.05■■■□□ 2.08
HOMER3-201ENST00000221222 RBM8AQ9Y5S9 174 aaKnown RBP28.05■■■□□ 2.08
HOMER3-201ENST00000221222 GREB1LQ9C091 1923 aaPredicted RBP28.04■■■□□ 2.08
HOMER3-201ENST00000221222 REC8O95072 547 aa28.04■■■□□ 2.08
HOMER3-201ENST00000221222 RASA1P20936 1047 aa28.04■■■□□ 2.08
HOMER3-201ENST00000221222 ZBTB21Q9ULJ3 1066 aa28.04■■■□□ 2.08
HOMER3-201ENST00000221222 PCP11498 1178 aaKnown RBP28.03■■■□□ 2.08
HOMER3-201ENST00000221222 PTPRAP18433 802 aa28.03■■■□□ 2.08
HOMER3-201ENST00000221222 ABCB5Q2M3G0 1257 aa28.03■■■□□ 2.08
HOMER3-201ENST00000221222 STAG1Q8WVM7 1258 aa28.03■■■□□ 2.08
HOMER3-201ENST00000221222 TACC3Q9Y6A5 838 aa28.03■■■□□ 2.08
HOMER3-201ENST00000221222 ORC4O43929 436 aa28.02■■■□□ 2.08
HOMER3-201ENST00000221222 GH2P01242 217 aa28.02■■■□□ 2.08
HOMER3-201ENST00000221222 ZBTB48P10074 688 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-201ENST00000221222 SHROOM1Q2M3G4 852 aaPredicted RBP28.02■■■□□ 2.08
HOMER3-201ENST00000221222 AKNAD1Q5T1N1 836 aa28.02■■■□□ 2.08
HOMER3-201ENST00000221222 TBC1D10CQ8IV04 446 aa28.02■■■□□ 2.08
HOMER3-201ENST00000221222 OPTNQ96CV9 577 aa28.02■■■□□ 2.08
HOMER3-201ENST00000221222 WNK4Q96J92 1243 aa28.02■■■□□ 2.08
HOMER3-201ENST00000221222 CCDC85CA6NKD9 419 aa28.01■■■□□ 2.07
HOMER3-201ENST00000221222 EPB41L2O43491 1005 aaKnown RBP28.01■■■□□ 2.07
HOMER3-201ENST00000221222 PRDM1O75626 825 aa28.01■■■□□ 2.07
HOMER3-201ENST00000221222 TRPA1O75762 1119 aa28.01■■■□□ 2.07
HOMER3-201ENST00000221222 PPATQ06203 517 aa28.01■■■□□ 2.07
HOMER3-201ENST00000221222 SPRYD7Q5W111 196 aa28.01■■■□□ 2.07
HOMER3-201ENST00000221222 CNKSR2Q8WXI2 1034 aa28.01■■■□□ 2.07
HOMER3-201ENST00000221222 RNF41Q9H4P4 317 aaPredicted RBP28.01■■■□□ 2.07
HOMER3-201ENST00000221222 CABP5Q9NP86 173 aa28.01■■■□□ 2.07
HOMER3-201ENST00000221222 CYP21A2P08686 494 aa28■■■□□ 2.07
HOMER3-201ENST00000221222 AKR1B1P15121 316 aa28■■■□□ 2.07
HOMER3-201ENST00000221222 NECTIN1Q15223 517 aa28■■■□□ 2.07
HOMER3-201ENST00000221222 MFSD6Q6ZSS7 791 aa28■■■□□ 2.07
HOMER3-201ENST00000221222 OTUD5Q96G74 571 aa28■■■□□ 2.07
HOMER3-201ENST00000221222 MCOLN1Q9GZU1 580 aa28■■■□□ 2.07
HOMER3-201ENST00000221222 RNF186Q9NXI6 227 aa28■■■□□ 2.07
HOMER3-201ENST00000221222 ZBTB4Q9P1Z0 1013 aaPredicted RBP28■■■□□ 2.07
HOMER3-201ENST00000221222 GJA5P36382 358 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 PPIL2Q13356 520 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 TMEM179Q6ZVK1 233 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 ZNF444Q8N0Y2 327 aaPredicted RBP27.99■■■□□ 2.07
HOMER3-201ENST00000221222 TBC1D2Q9BYX2 928 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 INCENPQ9NQS7 918 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.99■■■□□ 2.07
HOMER3-201ENST00000221222 PLIN4Q96Q06 1357 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 USP17L5A8MUK1 530 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 GUCY1A2P33402 732 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 DGKZQ13574 1117 aa27.99■■■□□ 2.07
HOMER3-201ENST00000221222 MPHOSPH10O00566 681 aaKnown RBP27.98■■■□□ 2.07
HOMER3-201ENST00000221222 EIF5BO60841 1220 aaKnown RBP27.98■■■□□ 2.07
HOMER3-201ENST00000221222 NT5C2P49902 561 aa27.98■■■□□ 2.07
HOMER3-201ENST00000221222 AFG3L2Q9Y4W6 797 aa27.98■■■□□ 2.07
HOMER3-201ENST00000221222 ZHX2Q9Y6X8 837 aa27.98■■■□□ 2.07
HOMER3-201ENST00000221222 PTPRFP10586 1907 aa27.98■■■□□ 2.07
HOMER3-201ENST00000221222 IRF6O14896 467 aa27.97■■■□□ 2.07
HOMER3-201ENST00000221222 MKRN3Q13064 507 aaKnown RBP27.97■■■□□ 2.07
HOMER3-201ENST00000221222 C8orf34Q49A92 452 aa27.97■■■□□ 2.07
HOMER3-201ENST00000221222 WDR18Q9BV38 432 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms