RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 MYBPC2Q14324 1141 aa11.96□□□□□ -0.49
VPS18-201ENST00000220509 SPATA5Q8NB90 893 aa11.96□□□□□ -0.49
VPS18-201ENST00000220509 KLHL23Q8NBE8 558 aa11.96□□□□□ -0.49
VPS18-201ENST00000220509 THOC1Q96FV9 657 aaKnown RBP11.96□□□□□ -0.49
VPS18-201ENST00000220509 COL5A2P05997 1499 aaPredicted RBP11.96□□□□□ -0.49
VPS18-201ENST00000220509 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.5
VPS18-201ENST00000220509 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.5
VPS18-201ENST00000220509 LRRN4CLQ8ND94 238 aa11.96□□□□□ -0.5
VPS18-201ENST00000220509 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.5
VPS18-201ENST00000220509 STK24Q9Y6E0 443 aa11.96□□□□□ -0.5
VPS18-201ENST00000220509 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 BCAMP50895 628 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 PARP10Q53GL7 1025 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 HSP90B2PQ58FF3 399 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 MCTP2Q6DN12 878 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 KAT14Q9H8E8 782 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 CBFA2T2O43439 604 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 ADD1P35611 737 aaKnown RBP11.95□□□□□ -0.5
VPS18-201ENST00000220509 AFMP43652 599 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 KARSQ15046 597 aaKnown RBP11.95□□□□□ -0.5
VPS18-201ENST00000220509 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 TRIM74Q86UV6 250 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 TRIM73Q86UV7 250 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 CPLX3Q8WVH0 158 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 MAST3O60307 1309 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 NEMFO60524 1076 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 ZNF280DQ6N043 979 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 PTF1AQ7RTS3 328 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 RPUSD2Q8IZ73 545 aaKnown RBP11.95□□□□□ -0.5
VPS18-201ENST00000220509 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 RABEP2Q9H5N1 569 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
VPS18-201ENST00000220509 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 TRIM37O94972 964 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 BAG3O95817 575 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 PNMA6AP0CW24 399 aaPredicted RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 PDE6AP16499 860 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 HSPA1LP34931 641 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 SCRN1Q12765 414 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 OSBP2Q969R2 916 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 LLPHQ9BRT6 129 aaKnown RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 VPS18Q9P253 973 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 G3BP2Q9UN86 482 aaKnown RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 PDE8BO95263 885 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 GYG1P46976 350 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 ST5P78524 1137 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 PALLDQ8WX93 1383 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 MED1Q15648 1581 aaPredicted RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 TOP1P11387 765 aaKnown RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 IL6STP40189 918 aaPredicted RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 APBB1IPQ7Z5R6 666 aaPredicted RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 USP28Q96RU2 1077 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 FUCA2Q9BTY2 467 aa11.94□□□□□ -0.5
VPS18-201ENST00000220509 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 PUF60Q9UHX1 559 aaKnown RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 CTDP1Q9Y5B0 961 aaPredicted RBP11.94□□□□□ -0.5
VPS18-201ENST00000220509 KIF2AO00139 706 aaPredicted RBP11.93□□□□□ -0.5
VPS18-201ENST00000220509 SPECC1Q5M775 1068 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 ZNF287Q9HBT7 754 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 ARFGAP3Q9NP61 516 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.93□□□□□ -0.5
VPS18-201ENST00000220509 GNAT2P19087 354 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 FOXO4P98177 505 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 TXLNBQ8N3L3 684 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 TDRD7Q8NHU6 1098 aaKnown RBP11.93□□□□□ -0.5
VPS18-201ENST00000220509 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 SRRTQ9BXP5 876 aaKnown RBP11.93□□□□□ -0.5
VPS18-201ENST00000220509 PLEKHA4Q9H4M7 779 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 SEC63Q9UGP8 760 aaKnown RBP11.93□□□□□ -0.5
VPS18-201ENST00000220509 KRT18P05783 430 aaKnown RBP11.93□□□□□ -0.5
VPS18-201ENST00000220509 GSDMDP57764 484 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 ITPK1Q13572 414 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 WWC2Q6AWC2 1192 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 CRACR2BQ8N4Y2 399 aaPredicted RBP11.93□□□□□ -0.5
VPS18-201ENST00000220509 TTLL11Q8NHH1 800 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 SMARCE1Q969G3 411 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 PGBD1Q96JS3 809 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 ETAA1Q9NY74 926 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 TCEAL9Q9UHQ7 104 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 TCHHQ07283 1943 aa11.93□□□□□ -0.5
VPS18-201ENST00000220509 M0R2C6 588 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 LDHCP07864 332 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.92□□□□□ -0.5
VPS18-201ENST00000220509 SDR42E1Q8WUS8 393 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 MAF1Q9H063 256 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 COQ9O75208 318 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 CAVIN2O95810 425 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 KIF5BP33176 963 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 FAM160A1Q05DH4 1040 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 STIM1Q13586 685 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
VPS18-201ENST00000220509 INF2Q27J81 1249 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms