RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 RTEL1Q9NZ71 1219 aa21.59■■□□□ 1.05
CTSA-201ENST00000191018 GOLGA6L4A6NEF3 574 aa21.58■■□□□ 1.05
CTSA-201ENST00000191018 NMT2O60551 498 aa21.58■■□□□ 1.05
CTSA-201ENST00000191018 DEXIO95424 95 aa21.58■■□□□ 1.05
CTSA-201ENST00000191018 SLC4A8Q2Y0W8 1093 aa21.58■■□□□ 1.05
CTSA-201ENST00000191018 RCSD1Q6JBY9 416 aa21.58■■□□□ 1.05
CTSA-201ENST00000191018 DEFB132Q7Z7B7 95 aa21.58■■□□□ 1.05
CTSA-201ENST00000191018 RNF26Q9BY78 433 aaPredicted RBP21.58■■□□□ 1.05
CTSA-201ENST00000191018 PDGFDQ9GZP0 370 aaPredicted RBP21.58■■□□□ 1.05
CTSA-201ENST00000191018 RBM28Q9NW13 759 aaKnown RBP21.58■■□□□ 1.05
CTSA-201ENST00000191018 C10orf71Q711Q0 1435 aa21.58■■□□□ 1.05
CTSA-201ENST00000191018 GUCY1A2P33402 732 aa21.58■■□□□ 1.04
CTSA-201ENST00000191018 CEBPZQ03701 1054 aaKnown RBP21.58■■□□□ 1.04
CTSA-201ENST00000191018 FUT2Q10981 343 aa21.58■■□□□ 1.04
CTSA-201ENST00000191018 SF3B2Q13435 895 aaKnown RBP21.58■■□□□ 1.04
CTSA-201ENST00000191018 SCN9AQ15858 1988 aa21.58■■□□□ 1.04
CTSA-201ENST00000191018 ADAMTSL1Q8N6G6 1762 aa21.57■■□□□ 1.04
CTSA-201ENST00000191018 POLR3DP05423 398 aaPredicted RBP21.57■■□□□ 1.04
CTSA-201ENST00000191018 U2AF2P26368 475 aaKnown RBP eCLIP21.57■■□□□ 1.04
CTSA-201ENST00000191018 TFAP4Q01664 338 aa21.57■■□□□ 1.04
CTSA-201ENST00000191018 ANKS1AQ92625 1134 aa21.57■■□□□ 1.04
CTSA-201ENST00000191018 POLR3EQ9NVU0 708 aa21.57■■□□□ 1.04
CTSA-201ENST00000191018 NASPP49321 788 aaPredicted RBP21.56■■□□□ 1.04
CTSA-201ENST00000191018 TRIM29Q14134 588 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 DGKHQ86XP1 1220 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 CMTR1Q8N1G2 835 aaKnown RBP21.56■■□□□ 1.04
CTSA-201ENST00000191018 FBXW7Q969H0 707 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 IL17RBQ9NRM6 502 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 TCP11L1Q9NUJ3 509 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 SAP30BPQ9UHR5 308 aaKnown RBP21.56■■□□□ 1.04
CTSA-201ENST00000191018 TTF2Q9UNY4 1162 aaKnown RBP21.56■■□□□ 1.04
CTSA-201ENST00000191018 G3V3G9 751 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 YEATS4O95619 227 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 DCAF8Q5TAQ9 597 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 LINC00301Q8NCQ3 95 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 MXD3Q9BW11 206 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 TSPY26PQ9H489 355 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 MKNK2Q9HBH9 465 aa21.56■■□□□ 1.04
CTSA-201ENST00000191018 RASA1P20936 1047 aa21.55■■□□□ 1.04
CTSA-201ENST00000191018 FKBP1AP62942 108 aaKnown RBP21.55■■□□□ 1.04
CTSA-201ENST00000191018 C16orf86Q6ZW13 317 aa21.55■■□□□ 1.04
CTSA-201ENST00000191018 DBNDD1Q9H9R9 158 aa21.55■■□□□ 1.04
CTSA-201ENST00000191018 CCDC178Q5BJE1 867 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 CC2D2BQ6DHV5 1058 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 HHIPL2Q6UWX4 724 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 CCDC82Q8N4S0 544 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 SLC44A5Q8NCS7 719 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 BICD2Q8TD16 824 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 ZNF287Q9HBT7 754 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 DDX19AQ9NUU7 478 aaKnown RBP21.54■■□□□ 1.04
CTSA-201ENST00000191018 DACT1Q9NYF0 836 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 F8W031 263 aaPredicted RBP21.54■■□□□ 1.04
CTSA-201ENST00000191018 PRPF3O43395 683 aaKnown RBP21.54■■□□□ 1.04
CTSA-201ENST00000191018 MMP1P03956 469 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 FUCA2Q9BTY2 467 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 CLIC4Q9Y696 253 aa21.54■■□□□ 1.04
CTSA-201ENST00000191018 KIF13BQ9NQT8 1826 aa21.53■■□□□ 1.04
CTSA-201ENST00000191018 PLEKHA8P1O95397 391 aa21.53■■□□□ 1.04
CTSA-201ENST00000191018 PKN1Q16512 942 aa21.53■■□□□ 1.04
CTSA-201ENST00000191018 STRIP1Q5VSL9 837 aa21.53■■□□□ 1.04
CTSA-201ENST00000191018 ZNF444Q8N0Y2 327 aaPredicted RBP21.53■■□□□ 1.04
CTSA-201ENST00000191018 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.53■■□□□ 1.04
CTSA-201ENST00000191018 NUP62CLQ9H1M0 184 aa21.53■■□□□ 1.04
CTSA-201ENST00000191018 KCNQ5Q9NR82 932 aa21.53■■□□□ 1.04
CTSA-201ENST00000191018 NR1I2O75469 434 aa21.52■■□□□ 1.04
CTSA-201ENST00000191018 CDK8P49336 464 aa21.52■■□□□ 1.04
CTSA-201ENST00000191018 CTCFLQ8NI51 663 aaPredicted RBP21.52■■□□□ 1.04
CTSA-201ENST00000191018 KCNG4Q8TDN1 519 aa21.52■■□□□ 1.04
CTSA-201ENST00000191018 SLC16A10Q8TF71 515 aa21.52■■□□□ 1.04
CTSA-201ENST00000191018 MAP3K14Q99558 947 aa21.52■■□□□ 1.04
CTSA-201ENST00000191018 ECE2O60344 883 aa21.52■■□□□ 1.03
CTSA-201ENST00000191018 WDHD1O75717 1129 aaPredicted RBP21.52■■□□□ 1.03
CTSA-201ENST00000191018 TSPY3P0CV98 308 aa21.52■■□□□ 1.03
CTSA-201ENST00000191018 TSPY8P0CW00 308 aa21.52■■□□□ 1.03
CTSA-201ENST00000191018 ANO1Q5XXA6 986 aa21.52■■□□□ 1.03
CTSA-201ENST00000191018 RBM43Q6ZSC3 357 aaKnown RBP21.52■■□□□ 1.03
CTSA-201ENST00000191018 MRIQ9BWK5 157 aa21.52■■□□□ 1.03
CTSA-201ENST00000191018 ZNF219Q9P2Y4 722 aaPredicted RBP21.52■■□□□ 1.03
CTSA-201ENST00000191018 PCDHA7Q9UN72 937 aa21.52■■□□□ 1.03
CTSA-201ENST00000191018 PSME4Q14997 1843 aa21.51■■□□□ 1.03
CTSA-201ENST00000191018 DACT2Q5SW24 774 aa21.51■■□□□ 1.03
CTSA-201ENST00000191018 TEKT1Q969V4 418 aa21.51■■□□□ 1.03
CTSA-201ENST00000191018 KAT14Q9H8E8 782 aa21.51■■□□□ 1.03
CTSA-201ENST00000191018 CNTNAP5Q8WYK1 1306 aa21.51■■□□□ 1.03
CTSA-201ENST00000191018 USP17L3A6NCW0 530 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 USP17L4A6NCW7 530 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 SCNN1DP51172 638 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 KIAA2012Q0VF49 1180 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 STK38Q15208 465 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 ADALQ6DHV7 355 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 APOBEC3HQ6NTF7 200 aaKnown RBP21.5■■□□□ 1.03
CTSA-201ENST00000191018 USP17L1Q7RTZ2 530 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 FOXP1Q9H334 677 aaPredicted RBP21.5■■□□□ 1.03
CTSA-201ENST00000191018 CLSTN2Q9H4D0 955 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 KCNJ14Q9UNX9 436 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 MYH8P13535 1937 aa21.5■■□□□ 1.03
CTSA-201ENST00000191018 A0A1W2PQ27 194 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 A0A1W2PQ64 194 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 A0A1W2PQD8 194 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms