RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ECE2O60344 883 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 CHRNA5P30532 468 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 KRT85P78386 507 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 IFIT1BQ5T764 474 aaKnown RBP11.35□□□□□ -0.59
PHGDH-215ENST00000641371 CHST3Q7LGC8 479 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 TRIM22Q8IYM9 498 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 SH3RF3Q8TEJ3 882 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-215ENST00000641371 ZDHHC15Q96MV8 337 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-215ENST00000641371 SCAND2PQ9GZW5 306 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-215ENST00000641371 PIM2Q9P1W9 311 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
PHGDH-215ENST00000641371 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 CFAP45Q9UL16 551 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 DAGLAQ9Y4D2 1042 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 CD2APQ9Y5K6 639 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 TNKSO95271 1327 aa11.35□□□□□ -0.59
PHGDH-215ENST00000641371 TSPY2A6NKD2 308 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 PPIP5K2O43314 1243 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 RANBP6O60518 1105 aaKnown RBP11.34□□□□□ -0.59
PHGDH-215ENST00000641371 IFNAR1P17181 557 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 RHBDL3P58872 404 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 CCT2P78371 535 aaKnown RBP11.34□□□□□ -0.59
PHGDH-215ENST00000641371 DIXDC1Q155Q3 683 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 RTN1Q16799 776 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 ZNF444Q8N0Y2 327 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-215ENST00000641371 TGFBRAP1Q8WUH2 860 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 ANKS1AQ92625 1134 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 FBXW7Q969H0 707 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 MKNK2Q9HBH9 465 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-215ENST00000641371 HDAC9Q9UKV0 1011 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 BRPF3Q9ULD4 1205 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 HPS5Q9UPZ3 1129 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 JAG2Q9Y219 1238 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
PHGDH-215ENST00000641371 ECM29Q5VYK3 1845 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 ELP1O95163 1332 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 FLT1P17948 1338 aa11.34□□□□□ -0.59
PHGDH-215ENST00000641371 TCHHQ07283 1943 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 COL2A1P02458 1487 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 CTDNEP1O95476 244 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 HLA-DOAP06340 250 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 XBP1P17861 261 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 KIF5BP33176 963 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 GNAQP50148 359 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 TRIM29Q14134 588 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 GSE1Q14687 1217 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 SEC23AQ15436 765 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 DACT2Q5SW24 774 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 C16orf86Q6ZW13 317 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 MICU3Q86XE3 530 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 ZNF654Q8IZM8 581 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 FAM177A1Q8N128 213 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 C8orf76Q96K31 380 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 DHX36Q9H2U1 1008 aaKnown RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 LMBRD1Q9NUN5 540 aa11.33□□□□□ -0.6
PHGDH-215ENST00000641371 BRCA1P38398 1863 aaKnown RBP11.33□□□□□ -0.6
PHGDH-215ENST00000641371 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-215ENST00000641371 JAK2O60674 1132 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 DPEP1P16444 411 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 CRKP46108 304 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 UBE2HP62256 183 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 AKAP17AQ02040 695 aaKnown RBP11.32□□□□□ -0.6
PHGDH-215ENST00000641371 DALRD3Q5D0E6 543 aaKnown RBP11.32□□□□□ -0.6
PHGDH-215ENST00000641371 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-215ENST00000641371 RNF26Q9BY78 433 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-215ENST00000641371 EHD4Q9H223 541 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 MYH8P13535 1937 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
PHGDH-215ENST00000641371 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 C21orf2O43822 256 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 PRPF40AO75400 957 aaKnown RBP11.31□□□□□ -0.6
PHGDH-215ENST00000641371 DEXIO95424 95 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-215ENST00000641371 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 TSPY3P0CV98 308 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 TSPY8P0CW00 308 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
PHGDH-215ENST00000641371 GRIK5Q16478 980 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 AOC3Q16853 763 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 MAPKAPK5Q8IW41 473 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 CERS5Q8N5B7 392 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 ENAHQ8N8S7 591 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-215ENST00000641371 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 FBXO18Q8NFZ0 1043 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 LZTS2Q9BRK4 669 aa11.31□□□□□ -0.6
PHGDH-215ENST00000641371 IDI2Q9BXS1 227 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms