RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 PLBD2Q8NHP8 589 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 HOMER2Q9NSB8 354 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 GOLGA6AQ9NYA3 693 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 KLHL42Q9P2K6 505 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 MRPL12P52815 198 aaKnown RBP3.42□□□□□ -1.86
LPP-222ENST00000640853 MYL5Q02045 173 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 CCDC65Q8IXS2 484 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 DISP1Q96F81 1524 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 PLCB1Q9NQ66 1216 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 MAGI2Q86UL8 1455 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 PHACTR2O75167 634 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 RHOXF2BP0C7M4 288 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 TNNC1P63316 161 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 CCDC122Q5T0U0 273 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 LGSNQ5TDP6 509 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 RAB11FIP4Q86YS3 637 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 RHOXF2Q9BQY4 288 aa3.42□□□□□ -1.86
LPP-222ENST00000640853 BICC1Q9H694 974 aaKnown RBP3.42□□□□□ -1.86
LPP-222ENST00000640853 RIMS2Q9UQ26 1411 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 TNNI3KQ59H18 835 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 NELFBQ8WX92 580 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 UBA5Q9GZZ9 404 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 TMEM51Q9NW97 253 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 FPGT-TNNI3KV9GXZ4 949 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 IRS4O14654 1257 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 IBSPP21815 317 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 PAK1Q13153 545 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 PUM3Q15397 648 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 TPCN1Q9ULQ1 816 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 HARSP12081 509 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 HNRNPH2P55795 449 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 ATP11AP98196 1134 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 OSBPL5Q9H0X9 879 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 MTRF1LQ9UGC7 380 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 PEG3Q9GZU2 1588 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 UHRF1BP1LA0JNW5 1464 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 KIF3CO14782 793 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 CIB2O75838 187 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 FAM182BQ5T319 152 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 ANGEL1Q9UNK9 670 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 ALS2CLQ60I27 953 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 CCDC174Q6PII3 467 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 BANK1Q8NDB2 785 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 CSRNP2Q9H175 543 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 ATP2A1O14983 1001 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 SFMBT2Q5VUG0 894 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 CFAP65Q6ZU64 1925 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 GBP1P32455 592 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 CCDC6Q16204 474 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 TDRD12Q587J7 1177 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 SPATA1Q5VX52 437 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 RUNDC3BQ96NL0 473 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 PPME1Q9Y570 386 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 IQGAP2Q13576 1575 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 ATP5DP30049 168 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 XPO4Q9C0E2 1151 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 GEMIN8Q9NWZ8 242 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 LMTK3Q96Q04 1460 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 POLR2DO15514 142 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 KCNQ3O43525 872 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 VIMP08670 466 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 STX17P56962 302 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 ARID5BQ14865 1188 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 MRFAP1L1Q96HT8 127 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 EFCAB8A8MWE9 144 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 DCAF5Q96JK2 942 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 PPIP5K1Q6PFW1 1433 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 UGGT2Q9NYU1 1516 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 GOLGA6BA6NDN3 693 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 B4DLN1 442 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 NDC80O14777 642 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 ACTN4O43707 911 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 HOXA7P31268 230 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 HOXC9P31274 260 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 LACTBP83111 547 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 FAM98CQ17RN3 349 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 SSH3Q8TE77 659 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 NLRP3Q96P20 1036 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 ARHGEF12Q9NZN5 1544 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 PRDM2Q13029 1718 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 WDR7Q9Y4E6 1490 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 FAM13AO94988 1023 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 HLA-DOAP06340 250 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 MMP14P50281 582 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 SARM1Q6SZW1 724 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 GSTA5Q7RTV2 222 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 NBPF5PQ86XG9 351 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 P3H4Q92791 437 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 EAF2Q96CJ1 260 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 USP28Q96RU2 1077 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 MYO1AQ9UBC5 1043 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 PIK3R4Q99570 1358 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 PSDA5PKW4 1024 aaPredicted RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 PFKFB2O60825 505 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 NEBLO76041 1014 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 SPATS2Q86XZ4 545 aaKnown RBP3.41□□□□□ -1.86
LPP-222ENST00000640853 ATP2C2O75185 946 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 ASIC2Q16515 512 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 HS2ST1Q7LGA3 356 aa3.41□□□□□ -1.86
LPP-222ENST00000640853 SETDB2Q96T68 719 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms