RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, human

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-222	ENST00000639482	RHOXF2	Q9BQY4	288 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	RIPOR2	Q9Y4F9	1068 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482		A0A1W2PQ27	194 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482		A0A1W2PQ64	194 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482		A0A1W2PQD8	194 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	PES1	O00541	588 aa	Known RBP	11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	CSF1R	P07333	972 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	GRIN1	Q05586	938 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	PHLPP1	O60346	1717 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	LTBP4	Q8N2S1	1624 aa		11.51	□□□□□ -0.57
SPIN3-222	ENST00000639482	hCG_1642624	A0A1W2PR95	340 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	TADA3	O75528	432 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	YEATS4	O95619	227 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	IL6ST	P40189	918 aa	Predicted RBP	11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	CCDC102B	Q68D86	513 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	CERS3	Q8IU89	383 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	ARFGAP3	Q9NP61	516 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	POLR3E	Q9NVU0	708 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	PARP3	Q9Y6F1	533 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	SLIT2	O94813	1529 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	GPAA1	O43292	621 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	ZSCAN12	O43309	604 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	CBFA2T2	O43439	604 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	TRIM65	Q6PJ69	517 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	NUP133	Q8WUM0	1156 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	HINFP	Q9BQA5	517 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	SUGCT	Q9HAC7	445 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	SAMSN1	Q9NSI8	373 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	KCNH3	Q9ULD8	1083 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	HPS5	Q9UPZ3	1129 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	JAG2	Q9Y219	1238 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	COL14A1	Q05707	1796 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	DOT1L	Q8TEK3	1739 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	SH3TC1	Q8TE82	1336 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	VWA3A	A6NCI4	1184 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	POLR2D	O15514	142 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	CMA1	P23946	247 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	CYP2C19	P33261	490 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	ANTXR2	P58335	489 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	PARD6B	Q9BYG5	372 aa		11.5	□□□□□ -0.57
SPIN3-222	ENST00000639482	PAPPA	Q13219	1627 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	CCDC93	Q567U6	631 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	REXO1L1P	Q8IX06	675 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	SALL1	Q9NSC2	1324 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	SOWAHD	A6NJG2	315 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	CAMTA2	O94983	1202 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	PRR29	P0C7W0	189 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	CAPN2	P17655	700 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	TRIM28	Q13263	835 aa	Known RBP	11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	SLC9C2	Q5TAH2	1124 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	CPLX2	Q6PUV4	134 aa	Known RBP	11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	ZNF34	Q8IZ26	560 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	GDAP1L1	Q96MZ0	367 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	VPS18	Q9P253	973 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	GOLGA8A	A7E2F4	631 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	BTBD18	B2RXH4	712 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	TRIM66	O15016	1216 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	PDE8A	O60658	829 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	IARS	P41252	1262 aa	Known RBP	11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	RAD51AP2	Q09MP3	1159 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	SLC39A14	Q15043	492 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	ATL3	Q6DD88	541 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	METTL16	Q86W50	562 aa	Known RBP	11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	PLEKHA4	Q9H4M7	779 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	USP21	Q9UK80	565 aa		11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	MYH14	Q7Z406	1995 aa	Known RBP	11.49	□□□□□ -0.57
SPIN3-222	ENST00000639482	BCAM	P50895	628 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	FMR1	Q06787	632 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	BRAP	Q7Z569	592 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	VSTM4	Q8IW00	320 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	KLHL34	Q8N239	644 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	JMY	Q8N9B5	988 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	MPHOSPH8	Q99549	860 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	HSD3B7	Q9H2F3	369 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	PIH1D3	Q9NQM4	214 aa	Known RBP	11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	GPS2	Q13227	327 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	KIF4B	Q2VIQ3	1234 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	ERFE	Q4G0M1	354 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	CCDC102A	Q96A19	550 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	SERTAD1	Q9UHV2	236 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	SRCAP	Q6ZRS2	3230 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	NEDD4	P46934	1319 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	CCP110	O43303	1012 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	TBC1D8	O95759	1140 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	USP49	Q70CQ1	688 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	INTS13	Q9NVM9	706 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	WWC3	Q9ULE0	1092 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	RIC1	Q4ADV7	1423 aa		11.48	□□□□□ -0.57
SPIN3-222	ENST00000639482	FOXP2	O15409	715 aa		11.47	□□□□□ -0.57
SPIN3-222	ENST00000639482	CIAO1	O76071	339 aa		11.47	□□□□□ -0.57
SPIN3-222	ENST00000639482	TMEM67	Q5HYA8	995 aa		11.47	□□□□□ -0.57
SPIN3-222	ENST00000639482	CYB5R4	Q7L1T6	521 aa		11.47	□□□□□ -0.57
SPIN3-222	ENST00000639482	EFCAB8	A8MWE9	144 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms