RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PI4KBQ9UBF8 816 aa26.29■■□□□ 1.8
SCN1B-206ENST00000638536 SPDYE5A6NIY4 337 aa26.28■■□□□ 1.8
SCN1B-206ENST00000638536 RNF113AO15541 343 aaKnown RBP26.28■■□□□ 1.8
SCN1B-206ENST00000638536 TM4SF4P48230 202 aa26.28■■□□□ 1.8
SCN1B-206ENST00000638536 CRNKL1Q9BZJ0 848 aaKnown RBP26.28■■□□□ 1.8
SCN1B-206ENST00000638536 RNF186Q9NXI6 227 aa26.28■■□□□ 1.8
SCN1B-206ENST00000638536 ATAD5Q96QE3 1844 aa26.28■■□□□ 1.8
SCN1B-206ENST00000638536 DOCK1Q14185 1865 aa26.28■■□□□ 1.8
SCN1B-206ENST00000638536 HSPA8P11142 646 aaKnown RBP26.28■■□□□ 1.8
SCN1B-206ENST00000638536 MS4A4AQ96JQ5 239 aa26.28■■□□□ 1.8
SCN1B-206ENST00000638536 CASP8AP2Q9UKL3 1982 aa26.27■■□□□ 1.8
SCN1B-206ENST00000638536 PHIPQ8WWQ0 1821 aa26.27■■□□□ 1.8
SCN1B-206ENST00000638536 IRF6O14896 467 aa26.27■■□□□ 1.8
SCN1B-206ENST00000638536 TRPA1O75762 1119 aa26.27■■□□□ 1.8
SCN1B-206ENST00000638536 NOL9Q5SY16 702 aaKnown RBP26.27■■□□□ 1.8
SCN1B-206ENST00000638536 ERO1BQ86YB8 467 aa26.27■■□□□ 1.8
SCN1B-206ENST00000638536 SEC62Q99442 399 aaKnown RBP26.27■■□□□ 1.8
SCN1B-206ENST00000638536 FSD1Q9BTV5 496 aa26.27■■□□□ 1.8
SCN1B-206ENST00000638536 BEGAINQ9BUH8 593 aa26.27■■□□□ 1.8
SCN1B-206ENST00000638536 DCP1AQ9NPI6 582 aaPredicted RBP26.27■■□□□ 1.8
SCN1B-206ENST00000638536 PLCD1P51178 756 aa26.26■■□□□ 1.79
SCN1B-206ENST00000638536 LBX1P52954 281 aa26.26■■□□□ 1.79
SCN1B-206ENST00000638536 CCDC84Q86UT8 332 aaPredicted RBP26.26■■□□□ 1.79
SCN1B-206ENST00000638536 METTL16Q86W50 562 aaKnown RBP26.26■■□□□ 1.79
SCN1B-206ENST00000638536 PTPN18Q99952 460 aa26.26■■□□□ 1.79
SCN1B-206ENST00000638536 SMIM22K7EJ46 135 aa26.25■■□□□ 1.79
SCN1B-206ENST00000638536 M0R2C6 588 aa26.25■■□□□ 1.79
SCN1B-206ENST00000638536 SHROOM1Q2M3G4 852 aaPredicted RBP26.25■■□□□ 1.79
SCN1B-206ENST00000638536 APPBP2Q92624 585 aa26.25■■□□□ 1.79
SCN1B-206ENST00000638536 OSBPL3Q9H4L5 887 aa26.25■■□□□ 1.79
SCN1B-206ENST00000638536 IGF2BP3O00425 579 aaKnown RBP eCLIP26.25■■□□□ 1.79
SCN1B-206ENST00000638536 JAG1P78504 1218 aa26.25■■□□□ 1.79
SCN1B-206ENST00000638536 SCYL3Q8IZE3 742 aa26.25■■□□□ 1.79
SCN1B-206ENST00000638536 STRBPQ96SI9 672 aaKnown RBP26.25■■□□□ 1.79
SCN1B-206ENST00000638536 MANSC4A6NHS7 340 aaPredicted RBP26.24■■□□□ 1.79
SCN1B-206ENST00000638536 CTNND1O60716 968 aaKnown RBP26.24■■□□□ 1.79
SCN1B-206ENST00000638536 CYP2D6P10635 497 aa26.24■■□□□ 1.79
SCN1B-206ENST00000638536 CTCFP49711 727 aaPredicted RBP26.24■■□□□ 1.79
SCN1B-206ENST00000638536 FOXP4Q8IVH2 680 aaPredicted RBP26.24■■□□□ 1.79
SCN1B-206ENST00000638536 MCM9Q9NXL9 1143 aa26.24■■□□□ 1.79
SCN1B-206ENST00000638536 HERC5Q9UII4 1024 aaKnown RBP26.24■■□□□ 1.79
SCN1B-206ENST00000638536 ZFYP08048 801 aaPredicted RBP26.23■■□□□ 1.79
SCN1B-206ENST00000638536 PPATQ06203 517 aa26.23■■□□□ 1.79
SCN1B-206ENST00000638536 SREBF2Q12772 1141 aa26.23■■□□□ 1.79
SCN1B-206ENST00000638536 REM2Q8IYK8 340 aaPredicted RBP26.23■■□□□ 1.79
SCN1B-206ENST00000638536 BRI3BPQ8WY22 251 aa26.23■■□□□ 1.79
SCN1B-206ENST00000638536 EVI5LQ96CN4 794 aa26.23■■□□□ 1.79
SCN1B-206ENST00000638536 SLC4A4Q9Y6R1 1079 aa26.23■■□□□ 1.79
SCN1B-206ENST00000638536 PTPRFP10586 1907 aa26.22■■□□□ 1.79
SCN1B-206ENST00000638536 PTPRAP18433 802 aa26.22■■□□□ 1.79
SCN1B-206ENST00000638536 PPIL2Q13356 520 aa26.22■■□□□ 1.79
SCN1B-206ENST00000638536 CYP2D7A0A087X1C5 515 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 TESPA1A2RU30 521 aaPredicted RBP26.21■■□□□ 1.79
SCN1B-206ENST00000638536 HLA-DOAP06340 250 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 CAP2P40123 477 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 IFNL1Q8IU54 200 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 CRACR2BQ8N4Y2 399 aaPredicted RBP26.21■■□□□ 1.79
SCN1B-206ENST00000638536 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 GPAA1O43292 621 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 POLR3DP05423 398 aaPredicted RBP26.21■■□□□ 1.79
SCN1B-206ENST00000638536 ZMYM1Q5SVZ6 1142 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 COL13A1Q5TAT6 717 aaPredicted RBP26.21■■□□□ 1.79
SCN1B-206ENST00000638536 ZHX2Q9Y6X8 837 aa26.21■■□□□ 1.79
SCN1B-206ENST00000638536 TRIM6-TRIM34B2RNG4 842 aa26.2■■□□□ 1.78
SCN1B-206ENST00000638536 TBC1D8O95759 1140 aa26.2■■□□□ 1.78
SCN1B-206ENST00000638536 ATP8A2Q9NTI2 1148 aa26.2■■□□□ 1.78
SCN1B-206ENST00000638536 SERPINB13Q9UIV8 391 aa26.2■■□□□ 1.78
SCN1B-206ENST00000638536 CCL15-CCL14A0A0B4J2E2 113 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 GSG1L2A8MUP6 293 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 CA12O43570 354 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 GDF11O95390 407 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 GTF2A2P52657 109 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 INHBEP58166 350 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 CCL15Q16663 113 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 TTC6Q86TZ1 520 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 RILPL2Q969X0 211 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 PICK1Q9NRD5 415 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 SAGE1Q9NXZ1 904 aa26.19■■□□□ 1.78
SCN1B-206ENST00000638536 CCDC129Q6ZRS4 1044 aa26.18■■□□□ 1.78
SCN1B-206ENST00000638536 EHD4Q9H223 541 aa26.18■■□□□ 1.78
SCN1B-206ENST00000638536 KCNH4Q9UQ05 1017 aa26.18■■□□□ 1.78
SCN1B-206ENST00000638536 AFG3L2Q9Y4W6 797 aa26.18■■□□□ 1.78
SCN1B-206ENST00000638536 USP17L12C9JPN9 530 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 USP17L21D6R901 530 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 GABPAQ06546 454 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 MOGSQ13724 837 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 SKAP1Q86WV1 359 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 FAM43AQ8N2R8 423 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 DYNLL2Q96FJ2 89 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 EPB41L4AQ9HCS5 686 aaPredicted RBP26.17■■□□□ 1.78
SCN1B-206ENST00000638536 SHMT1P34896 483 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 SNAPC2Q13487 334 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 LRRFIP1Q32MZ4 808 aaKnown RBP26.17■■□□□ 1.78
SCN1B-206ENST00000638536 TATDN1Q6P1N9 297 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 SLC44A5Q8NCS7 719 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 FAM227BQ96M60 508 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 TRIM34Q9BYJ4 488 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 MYH8P13535 1937 aa26.17■■□□□ 1.78
SCN1B-206ENST00000638536 CTR9Q6PD62 1173 aa26.16■■□□□ 1.78
SCN1B-206ENST00000638536 C12orf60Q5U649 245 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms