RNA–Protein interactions for RNA: ENST00000637128.1

LINC00959-202, Transcript of HCG1648656, isoform CRA_a, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINC00959, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-202ENST00000637128 MBD4O95243 580 aa15.31■□□□□ 0.04
LINC00959-202ENST00000637128 PLCG2P16885 1265 aa15.31■□□□□ 0.04
LINC00959-202ENST00000637128 PDE1AP54750 535 aa15.31■□□□□ 0.04
LINC00959-202ENST00000637128 MAP2K1Q02750 393 aaPredicted RBP15.31■□□□□ 0.04
LINC00959-202ENST00000637128 NUCB1Q02818 461 aa15.31■□□□□ 0.04
LINC00959-202ENST00000637128 ARMT1Q9H993 441 aa15.31■□□□□ 0.04
LINC00959-202ENST00000637128 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
LINC00959-202ENST00000637128 PALD1Q9ULE6 856 aa15.31■□□□□ 0.04
LINC00959-202ENST00000637128 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
LINC00959-202ENST00000637128 PRKAB2O43741 272 aa15.3■□□□□ 0.04
LINC00959-202ENST00000637128 IGSF3O75054 1194 aa15.3■□□□□ 0.04
LINC00959-202ENST00000637128 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
LINC00959-202ENST00000637128 RRP1BQ14684 758 aaKnown RBP15.3■□□□□ 0.04
LINC00959-202ENST00000637128 CHD1LQ86WJ1 897 aa15.3■□□□□ 0.04
LINC00959-202ENST00000637128 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
LINC00959-202ENST00000637128 SDR42E1Q8WUS8 393 aa15.3■□□□□ 0.04
LINC00959-202ENST00000637128 OTUD5Q96G74 571 aa15.3■□□□□ 0.04
LINC00959-202ENST00000637128 PUS7LQ9H0K6 701 aaKnown RBP15.3■□□□□ 0.04
LINC00959-202ENST00000637128 DNAJC18Q9H819 358 aa15.3■□□□□ 0.04
LINC00959-202ENST00000637128 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
LINC00959-202ENST00000637128 GLRX3O76003 335 aaKnown RBP15.29■□□□□ 0.04
LINC00959-202ENST00000637128 USP5P45974 858 aa15.29■□□□□ 0.04
LINC00959-202ENST00000637128 SHROOM1Q2M3G4 852 aaPredicted RBP15.29■□□□□ 0.04
LINC00959-202ENST00000637128 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
LINC00959-202ENST00000637128 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
LINC00959-202ENST00000637128 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
LINC00959-202ENST00000637128 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC00959-202ENST00000637128 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
LINC00959-202ENST00000637128 CSADQ9Y600 493 aa15.29■□□□□ 0.04
LINC00959-202ENST00000637128 PTPRFP10586 1907 aa15.28■□□□□ 0.04
LINC00959-202ENST00000637128 SPDYE5A6NIY4 337 aa15.28■□□□□ 0.04
LINC00959-202ENST00000637128 ERC2O15083 957 aa15.28■□□□□ 0.04
LINC00959-202ENST00000637128 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
LINC00959-202ENST00000637128 PDE4AP27815 886 aa15.28■□□□□ 0.04
LINC00959-202ENST00000637128 LBX1P52954 281 aa15.28■□□□□ 0.04
LINC00959-202ENST00000637128 MAP3K10Q02779 954 aa15.28■□□□□ 0.04
LINC00959-202ENST00000637128 UNCXA6NJT0 531 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 SMIM22K7EJ46 135 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 M0R2C6 588 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 IGF2BP3O00425 579 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00959-202ENST00000637128 CYP2D6P10635 497 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 UBE3CQ15386 1083 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.04
LINC00959-202ENST00000637128 PLEKHM2Q8IWE5 1019 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 OSBP2Q969R2 916 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.04
LINC00959-202ENST00000637128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.04
LINC00959-202ENST00000637128 RNF186Q9NXI6 227 aa15.27■□□□□ 0.04
LINC00959-202ENST00000637128 IRF6O14896 467 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
LINC00959-202ENST00000637128 TRPA1O75762 1119 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 PLCD1P51178 756 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 JAG1P78504 1218 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 TMED8Q6PL24 325 aaPredicted RBP15.26■□□□□ 0.03
LINC00959-202ENST00000637128 MS4A4AQ96JQ5 239 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 PTPN18Q99952 460 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 FSD1Q9BTV5 496 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 BEGAINQ9BUH8 593 aa15.26■□□□□ 0.03
LINC00959-202ENST00000637128 CRNKL1Q9BZJ0 848 aaKnown RBP15.26■□□□□ 0.03
LINC00959-202ENST00000637128 DCP1AQ9NPI6 582 aaPredicted RBP15.26■□□□□ 0.03
LINC00959-202ENST00000637128 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 TBC1D12O60347 775 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 TM4SF4P48230 202 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 CTCFP49711 727 aaPredicted RBP15.25■□□□□ 0.03
LINC00959-202ENST00000637128 COL13A1Q5TAT6 717 aaPredicted RBP15.25■□□□□ 0.03
LINC00959-202ENST00000637128 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 SCYL3Q8IZE3 742 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 BRI3BPQ8WY22 251 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 DHX36Q9H2U1 1008 aaKnown RBP15.25■□□□□ 0.03
LINC00959-202ENST00000637128 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
LINC00959-202ENST00000637128 MYH8P13535 1937 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 CYP2D7A0A087X1C5 515 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
LINC00959-202ENST00000637128 GDF11O95390 407 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 PPIL2Q13356 520 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 ZSCAN25Q6NSZ9 544 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 SKAP1Q86WV1 359 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 CERS3Q8IU89 383 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 APPBP2Q92624 585 aa15.24■□□□□ 0.03
LINC00959-202ENST00000637128 CCL15-CCL14A0A0B4J2E2 113 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 TBC1D8O95759 1140 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 HLA-DOAP06340 250 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 PTPRAP18433 802 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 SREBF2Q12772 1141 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 CCL15Q16663 113 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 METTL16Q86W50 562 aaKnown RBP15.23■□□□□ 0.03
LINC00959-202ENST00000637128 CRACR2BQ8N4Y2 399 aaPredicted RBP15.23■□□□□ 0.03
LINC00959-202ENST00000637128 SLC44A5Q8NCS7 719 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 STRBPQ96SI9 672 aaKnown RBP15.23■□□□□ 0.03
LINC00959-202ENST00000637128 EPB41L4AQ9HCS5 686 aaPredicted RBP15.23■□□□□ 0.03
LINC00959-202ENST00000637128 MCM9Q9NXL9 1143 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 HERC5Q9UII4 1024 aaKnown RBP15.23■□□□□ 0.03
LINC00959-202ENST00000637128 SLC4A4Q9Y6R1 1079 aa15.23■□□□□ 0.03
LINC00959-202ENST00000637128 LOC285556D6RIA3 1793 aa15.22■□□□□ 0.03
LINC00959-202ENST00000637128 TESPA1A2RU30 521 aaPredicted RBP15.22■□□□□ 0.03
LINC00959-202ENST00000637128 GPAA1O43292 621 aa15.22■□□□□ 0.03
LINC00959-202ENST00000637128 CTNND1O60716 968 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms