RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-230ENST00000636768 CPA4Q9UI42 421 aa18.29■□□□□ 0.52
CACNA1A-230ENST00000636768 HERC5Q9UII4 1024 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-230ENST00000636768 AFG3L2Q9Y4W6 797 aa18.29■□□□□ 0.52
CACNA1A-230ENST00000636768 RAB11FIP3O75154 756 aa18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 DYNLL1P63167 89 aaKnown RBP18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 CCDC84Q86UT8 332 aaPredicted RBP18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 TRIM34Q9BYJ4 488 aa18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 PI4KBQ9UBF8 816 aa18.28■□□□□ 0.52
CACNA1A-230ENST00000636768 ECM2O94769 699 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-230ENST00000636768 GPAT2Q6NUI2 795 aa18.27■□□□□ 0.52
CACNA1A-230ENST00000636768 C17orf99Q6UX52 265 aa18.27■□□□□ 0.52
CACNA1A-230ENST00000636768 CERS3Q8IU89 383 aa18.27■□□□□ 0.52
CACNA1A-230ENST00000636768 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
CACNA1A-230ENST00000636768 ARHGAP39Q9C0H5 1083 aa18.27■□□□□ 0.52
CACNA1A-230ENST00000636768 CYP2C8P10632 490 aa18.26■□□□□ 0.51
CACNA1A-230ENST00000636768 CAP2P40123 477 aa18.26■□□□□ 0.51
CACNA1A-230ENST00000636768 TTF1Q15361 905 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-230ENST00000636768 SAP30BPQ9UHR5 308 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-230ENST00000636768 PALD1Q9ULE6 856 aa18.26■□□□□ 0.51
CACNA1A-230ENST00000636768 PTCH2Q9Y6C5 1203 aa18.26■□□□□ 0.51
CACNA1A-230ENST00000636768 ADGRA2Q96PE1 1338 aa18.25■□□□□ 0.51
CACNA1A-230ENST00000636768 HLA-DOAP06340 250 aa18.25■□□□□ 0.51
CACNA1A-230ENST00000636768 USP5P45974 858 aa18.25■□□□□ 0.51
CACNA1A-230ENST00000636768 SLC9C1Q4G0N8 1177 aa18.25■□□□□ 0.51
CACNA1A-230ENST00000636768 TMED8Q6PL24 325 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-230ENST00000636768 DNAJC2Q99543 621 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-230ENST00000636768 USP17L5A8MUK1 530 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 GNRH1P01148 92 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 SPP2Q13103 211 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 SLC4A8Q2Y0W8 1093 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 ZNF280CQ8ND82 737 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 ARMC5Q96C12 935 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 TBC1D2Q9BYX2 928 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 SLC45A1Q9Y2W3 748 aa18.24■□□□□ 0.51
CACNA1A-230ENST00000636768 DOCK1Q14185 1865 aa18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 GOLIM4O00461 696 aa18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 PSMC4P43686 418 aa18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 RRP1BQ14684 758 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 FOXP4Q8IVH2 680 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 SMCR8Q8TEV9 937 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 AGTPBP1Q9UPW5 1226 aa18.23■□□□□ 0.51
CACNA1A-230ENST00000636768 HTTP42858 3142 aa18.22■□□□□ 0.51
CACNA1A-230ENST00000636768 HOXD10P28358 340 aa18.22■□□□□ 0.51
CACNA1A-230ENST00000636768 PRMT2P55345 433 aa18.22■□□□□ 0.51
CACNA1A-230ENST00000636768 SLC9C2Q5TAH2 1124 aa18.22■□□□□ 0.51
CACNA1A-230ENST00000636768 TRIM47Q96LD4 638 aa18.22■□□□□ 0.51
CACNA1A-230ENST00000636768 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
CACNA1A-230ENST00000636768 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 ASNSP08243 561 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 BCRP11274 1271 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 PDE6AP16499 860 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 HMGCS2P54868 508 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 TREML2Q5T2D2 321 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 PROCA1Q8NCQ7 364 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 ZNF333Q96JL9 665 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 LRRCC1Q9C099 1032 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 PNMA3Q9UL41 463 aa18.21■□□□□ 0.51
CACNA1A-230ENST00000636768 GDF11O95390 407 aa18.2■□□□□ 0.5
CACNA1A-230ENST00000636768 CTGFP29279 349 aa18.2■□□□□ 0.5
CACNA1A-230ENST00000636768 FCGRTP55899 365 aa18.2■□□□□ 0.5
CACNA1A-230ENST00000636768 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-230ENST00000636768 TMEM106CQ9BVX2 250 aa18.2■□□□□ 0.5
CACNA1A-230ENST00000636768 SRRDQ9UH36 339 aa18.2■□□□□ 0.5
CACNA1A-230ENST00000636768 POTEFA5A3E0 1075 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 OSBPP22059 807 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 PABPC4Q13310 644 aaKnown RBP eCLIP18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 TTC6Q86TZ1 520 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 RAET1EQ8TD07 263 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 SH3TC2Q8TF17 1288 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 EDC3Q96F86 508 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 RIOK1Q9BRS2 568 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 PAG1Q9NWQ8 432 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 MYPNQ86TC9 1320 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 ZNF532Q9HCE3 1301 aa18.19■□□□□ 0.5
CACNA1A-230ENST00000636768 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 ATP5JP18859 108 aa18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 MTMR2Q13614 643 aa18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 WDR18Q9BV38 432 aa18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 GINM1Q9NU53 330 aa18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 TMOD4Q9NZQ9 345 aa18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 SERPINB13Q9UIV8 391 aa18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 ZBTB21Q9ULJ3 1066 aa18.18■□□□□ 0.5
CACNA1A-230ENST00000636768 BACE1P56817 501 aa18.17■□□□□ 0.5
CACNA1A-230ENST00000636768 JAG1P78504 1218 aa18.17■□□□□ 0.5
CACNA1A-230ENST00000636768 SHROOM1Q2M3G4 852 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-230ENST00000636768 SH3D19Q5HYK7 790 aa18.17■□□□□ 0.5
CACNA1A-230ENST00000636768 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.17■□□□□ 0.5
CACNA1A-230ENST00000636768 EHD4Q9H223 541 aa18.17■□□□□ 0.5
CACNA1A-230ENST00000636768 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms