RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	CNTNAP1	P78357	1384 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	GLTPD2	A6NH11	291 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058		B4E1Z4	1266 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	MCM5	P33992	734 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	EPS15	P42566	896 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	MCM2	P49736	904 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	AK2	P54819	239 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ANTXR2	P58335	489 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	GABPA	Q06546	454 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	PDE4B	Q07343	736 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TCP10	Q12799	353 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	BECN1	Q14457	450 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SLC4A8	Q2Y0W8	1093 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	RBM26	Q5T8P6	1007 aa	Known RBP	11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	C16orf86	Q6ZW13	317 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SH3BP5L	Q7L8J4	393 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	FAM83A	Q86UY5	434 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	HSCB	Q8IWL3	235 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	STK11IP	Q8N1F8	1099 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	FBXL16	Q8N461	479 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	FAM151A	Q8WW52	585 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	DYNLL2	Q96FJ2	89 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TCEANC2	Q96MN5	208 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	IPO9	Q96P70	1041 aa	Known RBP	11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	AGXT2	Q9BYV1	514 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	EHD4	Q9H223	541 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TAOK2	Q9UL54	1235 aa		11.33	□□□□□ -0.6
CACNA1A-223	ENST00000636058	DDTL	A6NHG4	134 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TCP10L2	B9ZVM9	353 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058		K7ELQ4	463 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	PRC1	O43663	620 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	KDM4A	O75164	1064 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	PRDM1	O75626	825 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	HLA-DOA	P06340	250 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	LMOD1	P29536	600 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TOB2	Q14106	344 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ANKRD1	Q15327	319 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	CYB5R4	Q7L1T6	521 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TRPM4	Q8TD43	1214 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ESR2	Q92731	530 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	MTA3	Q9BTC8	594 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	VEZT	Q9HBM0	779 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ZNF287	Q9HBT7	754 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ADARB2	Q9NS39	739 aa	Known RBP	11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ZSWIM5	Q9P217	1185 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	PI4KB	Q9UBF8	816 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SERPINB13	Q9UIV8	391 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SCN4A	P35499	1836 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	WDR90	Q96KV7	1748 aa		11.32	□□□□□ -0.6
CACNA1A-223	ENST00000636058	CDK8	P49336	464 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	HIRA	P54198	1017 aa	Predicted RBP	11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TNFAIP1	Q13829	316 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	RRP12	Q5JTH9	1297 aa	Known RBP	11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058		Q6ZUG5	572 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	CHST3	Q7LGC8	479 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	METTL16	Q86W50	562 aa	Known RBP	11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SLC44A5	Q8NCS7	719 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TMEM87B	Q96K49	555 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	LRRC2	Q9BYS8	371 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TOMM22	Q9NS69	142 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SWAP70	Q9UH65	585 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	PGAP2	Q9UHJ9	254 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	HACL1	Q9UJ83	578 aa		11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ASTN2	O75129	1339 aa	Predicted RBP	11.31	□□□□□ -0.6
CACNA1A-223	ENST00000636058	RASA1	P20936	1047 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TNNI2	P48788	182 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	EVC	P57679	992 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	IGDCC4	Q8TDY8	1250 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	BRF1	Q92994	677 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TMEM39B	Q9GZU3	492 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	DNAJC18	Q9H819	358 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	MKNK2	Q9HBH9	465 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	LIMCH1	Q9UPQ0	1083 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	MYH8	P13535	1937 aa		11.3	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SH2B2	O14492	632 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	RANBP6	O60518	1105 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	SHMT1	P34896	483 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	FGD1	P98174	961 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	RASA3	Q14644	834 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ANGEL2	Q5VTE6	544 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	NOL8	Q76FK4	1167 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TMX3	Q96JJ7	454 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TEPSIN	Q96N21	525 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	CSRNP1	Q96S65	589 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	GPHN	Q9NQX3	736 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TPCN1	Q9ULQ1	816 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	ANGEL1	Q9UNK9	670 aa	Known RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	PITPNM2	Q9BZ72	1349 aa		11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	GREB1L	Q9C091	1923 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA1A-223	ENST00000636058	PLIN4	Q96Q06	1357 aa		11.28	□□□□□ -0.6
CACNA1A-223	ENST00000636058	IQCA1L	A6NCM1	817 aa		11.28	□□□□□ -0.6
CACNA1A-223	ENST00000636058	DCAF8L1	A6NGE4	600 aa		11.28	□□□□□ -0.6
CACNA1A-223	ENST00000636058	TSPY2	A6NKD2	308 aa		11.28	□□□□□ -0.6
CACNA1A-223	ENST00000636058	POTEC	B2RU33	542 aa		11.28	□□□□□ -0.6
CACNA1A-223	ENST00000636058	EPHX2	P34913	555 aa		11.28	□□□□□ -0.6
CACNA1A-223	ENST00000636058	LIFR	P42702	1097 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms