RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SH3GLB2Q9NR46 395 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ADAMTS7Q9UKP4 1686 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ORC4O43929 436 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 TOP1P11387 765 aaKnown RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ERCC5P28715 1186 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 TUBB2AQ13885 445 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 CFAP100Q494V2 611 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 C8orf37Q96NL8 207 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 TUBB2BQ9BVA1 445 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 GGA1Q9UJY5 639 aa5.21□□□□□ -1.58
SCN1A-210ENST00000635776 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCN1A-210ENST00000635776 ALDH1B1P30837 517 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 GRAPQ13588 217 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 TRIM14Q14142 442 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 GRIPAP1Q4V328 841 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 CCDC70Q6NSX1 233 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 GRAPLQ8TC17 118 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-210ENST00000635776 NOC3LQ8WTT2 800 aaKnown RBP5.2□□□□□ -1.58
SCN1A-210ENST00000635776 CBX8Q9HC52 389 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 PCDHA7Q9UN72 937 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 TNKSO95271 1327 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 ZNF202O95125 648 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 TTLL5Q6EMB2 1281 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 FAM196AQ6ZSG2 479 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 NLGN1Q8N2Q7 840 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 PDCL3Q9H2J4 239 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 MCM9Q9NXL9 1143 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 TUBBP07437 444 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 CDK5RAP3Q96JB5 506 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 TMOD2Q9NZR1 351 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 CC2D2BQ6DHV5 1058 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 CUEDC2Q9H467 287 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 MRVI1Q9Y6F6 885 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 ARL6IP4Q66PJ3 421 aaKnown RBP5.2□□□□□ -1.58
SCN1A-210ENST00000635776 KRT25Q7Z3Z0 450 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 MNS1Q8NEH6 495 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-210ENST00000635776 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCN1A-210ENST00000635776 KCNJ6P48051 423 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 SUPT20HQ8NEM7 779 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 WWC3Q9ULE0 1092 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 MMP1P03956 469 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 LIG1P18858 919 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 FAM98CQ17RN3 349 aaKnown RBP5.2□□□□□ -1.58
SCN1A-210ENST00000635776 CCDC186Q7Z3E2 898 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 SPC24Q8NBT2 197 aa5.2□□□□□ -1.58
SCN1A-210ENST00000635776 NCOA5Q9HCD5 579 aaKnown RBP5.2□□□□□ -1.58
SCN1A-210ENST00000635776 STOX1Q6ZVD7 989 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 CCDC51Q96ER9 411 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 GSDMAQ96QA5 445 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 NAA15Q9BXJ9 866 aaKnown RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 NDUFB9Q9Y6M9 179 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 COL14A1Q05707 1796 aaKnown RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 UBA7P41226 1012 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 MARCH10Q8NA82 808 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 CALML4Q96GE6 196 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 ZC3H12CQ9C0D7 883 aaKnown RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 SALL1Q9NSC2 1324 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 U2AF2P26368 475 aaKnown RBP eCLIP5.19□□□□□ -1.581e-6■■■□□ 14.9
SCN1A-210ENST00000635776 SMARCA1P28370 1054 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 SYCP1Q15431 976 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 FILIP1Q7Z7B0 1213 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 RRP36Q96EU6 259 aaKnown RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 SPEF2Q9C093 1822 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 EHMT1Q9H9B1 1298 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 UQCRHLA0A096LP55 91 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 UQCRHP07919 91 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 LONP1P36776 959 aaKnown RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 BCAMP50895 628 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 CRACR2BQ8N4Y2 399 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 MIGA1Q8NAN2 632 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 ERCC4Q92889 916 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 AK8Q96MA6 479 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 ACBD3Q9H3P7 528 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 KRBA2Q6ZNG9 492 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 MINPP1Q9UNW1 487 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 BICDL2A1A5D9 508 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 POTEB2H3BUK9 544 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 PFKFB1P16118 471 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 VGLL2Q8N8G2 317 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 EHBP1Q8NDI1 1231 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 UBASH3AP57075 661 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 INTS5Q6P9B9 1019 aaKnown RBP5.19□□□□□ -1.58
SCN1A-210ENST00000635776 CHST3Q7LGC8 479 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 SWAP70Q9UH65 585 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 KCPQ6ZWJ8 1503 aa5.19□□□□□ -1.58
SCN1A-210ENST00000635776 PSDA5PKW4 1024 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 GSG1L2A8MUP6 293 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 SKILP12757 684 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 ATP2B1P20020 1258 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 LUZP1Q86V48 1076 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 AOPEPQ8N6M6 819 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 CCDC17Q96LX7 622 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 ZSWIM5Q9P217 1185 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 PSMA7O14818 248 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 PDE6BP35913 854 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 C15orf52Q6ZUT6 534 aaKnown RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 GOLGA6L1Q8N7Z2 621 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 PNMA2Q9UL42 364 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms