RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 CHMLP26374 656 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 IRX3P78415 501 aaPredicted RBP13.11□□□□□ -0.31
SHPRH-211ENST00000629427 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
SHPRH-211ENST00000629427 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 RAD51AP2Q09MP3 1159 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 ANO3Q9BYT9 981 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 HAUS2Q9NVX0 235 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 DNM3Q9UQ16 869 aa13.11□□□□□ -0.31
SHPRH-211ENST00000629427 VIMP08670 466 aaKnown RBP13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CUL4BQ13620 913 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 RIOK1Q9BRS2 568 aaKnown RBP13.1□□□□□ -0.31
SHPRH-211ENST00000629427 METTL22Q9BUU2 404 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-211ENST00000629427 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
SHPRH-211ENST00000629427 H7C1D1 291 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 GPAA1O43292 621 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CFBP00751 764 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CASC4Q6P4E1 433 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 METTL13Q8N6R0 699 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 VAMP4O75379 141 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 SATB1Q01826 763 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 GLT8D2Q9H1C3 349 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CLSTN2Q9H4D0 955 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 STK24Q9Y6E0 443 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CTDSPL2Q05D32 466 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 TNNI3KQ59H18 835 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 TGFBRAP1Q8WUH2 860 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 DCTPP1Q9H773 170 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 STIM2Q9P246 746 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 FPGT-TNNI3KV9GXZ4 949 aa13.1□□□□□ -0.31
SHPRH-211ENST00000629427 CPA1P15085 419 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 PRPF31Q8WWY3 499 aaKnown RBP13.09□□□□□ -0.31
SHPRH-211ENST00000629427 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
SHPRH-211ENST00000629427 ERCC3P19447 782 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 PLEKHM2Q8IWE5 1019 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 CDCA7Q9BWT1 371 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-211ENST00000629427 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 ZHX1Q9UKY1 873 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-211ENST00000629427 APBA3O96018 575 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 MYL5Q02045 173 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 CCDC110Q8TBZ0 833 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.09□□□□□ -0.31
SHPRH-211ENST00000629427 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 INTS8Q75QN2 995 aaKnown RBP13.09□□□□□ -0.31
SHPRH-211ENST00000629427 CSGALNACT2Q8N6G5 542 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 SNX21Q969T3 373 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 RILPL1Q5EBL4 403 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 CETN3O15182 167 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 UTP14CQ5TAP6 766 aaKnown RBP13.09□□□□□ -0.31
SHPRH-211ENST00000629427 ATL3Q6DD88 541 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
SHPRH-211ENST00000629427 ALDH1B1P30837 517 aa13.08□□□□□ -0.31
SHPRH-211ENST00000629427 FAM47CQ5HY64 1035 aa13.08□□□□□ -0.31
SHPRH-211ENST00000629427 ZNF365Q70YC5 407 aa13.08□□□□□ -0.31
SHPRH-211ENST00000629427 SLC27A2O14975 620 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 CEP57Q86XR8 500 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 SYNRGQ9UMZ2 1314 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 EYA2O00167 538 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 DYMQ7RTS9 669 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 PRDM1O75626 825 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 ZFYVE9O95405 1425 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 A1BGP04217 495 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 ADCY7P51828 1080 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 APPBP2Q92624 585 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.32
SHPRH-211ENST00000629427 ZBTB24O43167 697 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-211ENST00000629427 BEND3Q5T5X7 828 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 CSADQ9Y600 493 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 PPIP5K2O43314 1243 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 HPDP32754 393 aaPredicted RBP13.08□□□□□ -0.32
SHPRH-211ENST00000629427 DLGAP5Q15398 846 aa13.08□□□□□ -0.32
SHPRH-211ENST00000629427 EBAG9O00559 213 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 ABL1P00519 1130 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 GPR162Q16538 588 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 PHACTR3Q96KR7 559 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 RAD50Q92878 1312 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 CIB2O75838 187 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 HERC4Q5GLZ8 1057 aaPredicted RBP13.07□□□□□ -0.32
SHPRH-211ENST00000629427 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
SHPRH-211ENST00000629427 STMN2Q93045 179 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms