RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 METTL16Q86W50 562 aaKnown RBP16.36■□□□□ 0.21
SOX2-OT-248ENST00000628496 DNAJC18Q9H819 358 aa16.36■□□□□ 0.21
SOX2-OT-248ENST00000628496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.36■□□□□ 0.21
SOX2-OT-248ENST00000628496 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
SOX2-OT-248ENST00000628496 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
SOX2-OT-248ENST00000628496 FOCADQ5VW36 1801 aa16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 SPDYE5A6NIY4 337 aa16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 OTUD5Q96G74 571 aa16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 HERC5Q9UII4 1024 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 DDX60LQ5H9U9 1706 aaKnown RBP16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 PCNTO95613 3336 aa16.35■□□□□ 0.21
SOX2-OT-248ENST00000628496 SIPA1L1O43166 1804 aa16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 CDK5RAP2Q96SN8 1893 aa16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 FOXN1O15353 648 aa16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 NEFLP07196 543 aa16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 EVX2Q03828 476 aa16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
SOX2-OT-248ENST00000628496 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 GPAA1O43292 621 aa16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 PLCD1P51178 756 aa16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 CENPQQ7L2Z9 268 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 FOXP4Q8IVH2 680 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 ATP8A2Q9NTI2 1148 aa16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
SOX2-OT-248ENST00000628496 MANSC4A6NHS7 340 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 CYP2D6P10635 497 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 PTPRAP18433 802 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 TM4SF4P48230 202 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 PPATQ06203 517 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 PPIL2Q13356 520 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 EHD4Q9H223 541 aa16.32■□□□□ 0.2
SOX2-OT-248ENST00000628496 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 IRF6O14896 467 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 JAG1P78504 1218 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 CCDC84Q86UT8 332 aaPredicted RBP16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 RNF186Q9NXI6 227 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 SERPINB13Q9UIV8 391 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 MYH7P12883 1935 aa16.31■□□□□ 0.2
SOX2-OT-248ENST00000628496 CYP2D7A0A087X1C5 515 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 A0A0D9SFI3 127 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 CAP2P40123 477 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 GABPAQ06546 454 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 CCDC129Q6ZRS4 1044 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 FAM227BQ96M60 508 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 PTPN18Q99952 460 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 NAV1Q8NEY1 1877 aa16.3■□□□□ 0.2
SOX2-OT-248ENST00000628496 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 USP17L21D6R901 530 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 IGF2BP3O00425 579 aaKnown RBP eCLIP16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 CA12O43570 354 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 TRPA1O75762 1119 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 SHMT1P34896 483 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 GTF2A2P52657 109 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 INHBEP58166 350 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 NMIQ13287 307 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 TATDN1Q6P1N9 297 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 IFNL1Q8IU54 200 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 SAGE1Q9NXZ1 904 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 KCNH4Q9UQ05 1017 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 ZHX2Q9Y6X8 837 aa16.29■□□□□ 0.2
SOX2-OT-248ENST00000628496 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 FOXP2O15409 715 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 GDF11O95390 407 aa16.28■□□□□ 0.2
SOX2-OT-248ENST00000628496 GNAT2P19087 354 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms