RNA–Protein interactions for RNA: ENST00000628368.1

CPS1-IT1-201, CPS1 intronic transcript 1, humanhuman

BASIC

Gene CPS1-IT1, Length 2,306 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-IT1-201ENST00000628368 CHMP4CQ96CF2 233 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 CHAMP1Q96JM3 812 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 ZKSCAN3Q9BRR0 538 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 ZBTB12Q9Y330 459 aaPredicted RBP6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 ZNF646O15015 1829 aaPredicted RBP6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 USP17L3A6NCW0 530 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 USP17L4A6NCW7 530 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 DHX16O60231 1041 aaKnown RBP6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 PRDM1O75626 825 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 SLC3A2P08195 630 aaKnown RBP6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 MCTP1Q6DN14 999 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 APOA5Q6Q788 366 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 HHIPL2Q6UWX4 724 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 USP17L1Q7RTZ2 530 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 MAPKAPK5Q8IW41 473 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 DDX11Q96FC9 970 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 PSMD1Q99460 953 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 SGIP1Q9BQI5 828 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 PIM2Q9P1W9 311 aa6.84□□□□□ -1.31
CPS1-IT1-201ENST00000628368 PTPDC1A2A3K4 754 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PPIP5K2O43314 1243 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 RANBP6O60518 1105 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 F13A1P00488 732 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SCNN1DP51172 638 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PLCD1P51178 756 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 HMGN5P82970 282 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 WTAPQ15007 396 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SART3Q15020 963 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SEC23AQ15436 765 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 NFXL1Q6ZNB6 911 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 TMTC2Q8N394 836 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ZSCAN10Q96SZ4 725 aaPredicted RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 MRIQ9BWK5 157 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 NAV1Q8NEY1 1877 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ROBO3Q96MS0 1386 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FLT1P17948 1338 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ERICH2A1L162 156 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 VPS37CA5D8V6 355 aaPredicted RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CCDC69A6NI79 296 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 YDJCA8MPS7 323 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 GOLGA6L22H0YM25 854 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ZBTB43O43298 467 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 TRAK2O60296 914 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FDPSP14324 419 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PTMSP20962 102 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ADD1P35611 737 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 METAP2P50579 478 aaKnown RBP eCLIP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PDE4BQ07343 736 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SLC4A8Q2Y0W8 1093 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 APOBEC3HQ6NTF7 200 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 AMOTL1Q8IY63 956 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FAM184AQ8NB25 1140 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 TEKT1Q969V4 418 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 DYNLL2Q96FJ2 89 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 UBAC1Q9BSL1 405 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FAM217BQ9NTX9 383 aaPredicted RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 LMBRD1Q9NUN5 540 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SAP30BPQ9UHR5 308 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SLC12A7Q9Y666 1083 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FOCADQ5VW36 1801 aa6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 DDX60LQ5H9U9 1706 aaKnown RBP6.83□□□□□ -1.32
CPS1-IT1-201ENST00000628368 TNKSO95271 1327 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ADAMTSL1Q8N6G6 1762 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PSDA5PKW4 1024 aaPredicted RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PPFIA3O75145 1194 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 POLR3DP05423 398 aaPredicted RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 RXRAP19793 462 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CDC27P30260 824 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PTGER2P43116 358 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CRKP46108 304 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 HDLBPQ00341 1268 aaKnown RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FOXD4L6Q3SYB3 417 aaPredicted RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 DALRD3Q5D0E6 543 aaKnown RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SOGA3Q5TF21 947 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FOXD4L3Q6VB84 417 aaPredicted RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CDC37L1Q7L3B6 337 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 MICU3Q86XE3 530 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 IQCA1Q86XH1 822 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 KIAA0825Q8IV33 1275 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ENAHQ8N8S7 591 aaPredicted RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ZDHHC15Q96MV8 337 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 MYL10Q9BUA6 226 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 VPS33BQ9H267 617 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 ZNF277Q9NRM2 450 aaPredicted RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 USP40Q9NVE5 1235 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CD2APQ9Y5K6 639 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 NID2Q14112 1375 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 MYH1P12882 1939 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 BRCA1P38398 1863 aaKnown RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 COL4A5P29400 1685 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CPLX1O14810 134 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 PRPF40AO75400 957 aaKnown RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 WDHD1O75717 1129 aaPredicted RBP6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 NT5C2P49902 561 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 NTRK3Q16288 839 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 FAM47AQ5JRC9 791 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CDC42EP5Q6NZY7 148 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 SYNE3Q6ZMZ3 975 aa6.82□□□□□ -1.32
CPS1-IT1-201ENST00000628368 CCDC144CPQ8IYA2 1237 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms