RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 NOB1Q9ULX3 412 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SHROOM3Q8TF72 1996 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 BIN1O00499 593 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MAN1A2O60476 641 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TMEM127O75204 238 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 PDHA1P08559 390 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 PCSK2P16519 638 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SAFBQ15424 915 aaKnown RBP eCLIP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CWF19L2Q2TBE0 894 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 PPP4R3BQ5MIZ7 849 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 DDI2Q5TDH0 399 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 FERMT3Q86UX7 667 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 GTF3C6Q969F1 213 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 H7C0S8 307 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SULT1B1O43704 296 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 OPHN1O60890 802 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SYT1P21579 422 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 NBPF8Q3BBV2 869 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 JMYQ8N9B5 988 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ZNF483Q8TF39 744 aaPredicted RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 GCC1Q96CN9 775 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TTC1Q99614 292 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 DRC3Q9H069 523 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MAGED2Q9UNF1 606 aaPredicted RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 LOXHD1Q8IVV2 1947 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ARFGEF2Q9Y6D5 1785 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SYCE1LA8MT33 242 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 HSF2BPO75031 334 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CCNCP24863 283 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MRPS9P82933 396 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TAF11Q15544 211 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SULT1C3Q6IMI6 304 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CACNA2D4Q7Z3S7 1137 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CATSPER3Q86XQ3 398 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SRRM1Q8IYB3 904 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 IQCDQ96DY2 449 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ERLEC1Q96DZ1 483 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 PHACTR3Q96KR7 559 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MPHOSPH9Q99550 1183 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 KIFC3Q9BVG8 833 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TRIM31Q9BZY9 425 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CTTNBP2NLQ9P2B4 639 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SCINQ9Y6U3 715 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 AKAP11Q9UKA4 1901 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 STK25O00506 426 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SCAMP1O15126 338 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ARL1P40616 181 aaPredicted RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ATP11AP98196 1134 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 GRSF1Q12849 480 aaKnown RBP eCLIP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SLC22A15Q8IZD6 547 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 UBL4BQ8N7F7 174 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 PDCD6IPQ8WUM4 868 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 DDX28Q9NUL7 540 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 PARVAQ9NVD7 372 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ATPIF1Q9UII2 106 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SYNJ2BP-COX16A0A087WUM0 186 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CREB3O43889 395 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 S100A9P06702 114 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 INPP5BP32019 993 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 DDIT3P35638 169 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TNNI2P48788 182 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 EXOSC9Q06265 439 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CUL4BQ13620 913 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 NDUFAF2Q8N183 169 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ATP2A3Q93084 1043 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CYTH2Q99418 400 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TRIM8Q9BZR9 551 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 OGFRQ9NZT2 677 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MAP10Q9P2G4 905 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CFAP69A5D8W1 941 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 AP3D1O14617 1153 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CASQ2O14958 399 aaPredicted RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ATP8B1O43520 1251 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MTRF1O75570 445 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CAPN1P07384 714 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 DNAJA1P31689 397 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MAP3K9P80192 1104 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 NAA15Q9BXJ9 866 aaKnown RBP3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ECT2Q9H8V3 914 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SYNPO2Q9UMS6 1093 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 ZNF518AQ6AHZ1 1483 aa3.24□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SIGLEC1Q9BZZ2 1709 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 EFCAB6Q5THR3 1501 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 EIF3CLB5ME19 914 aaKnown RBP3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SMARCA5O60264 1052 aaPredicted RBP3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 KRT9P35527 623 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CCDC30Q5VVM6 783 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CC2D1AQ6P1N0 951 aaPredicted RBP3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 BNIPLQ7Z465 357 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SH3KBP1Q96B97 665 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SH3GL1Q99961 368 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 TTC12Q9H892 705 aaPredicted RBP3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 SESN1Q9Y6P5 492 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 MTIF2P46199 727 aaKnown RBP3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 KCNJ4P48050 445 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 CLUL1Q15846 466 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 RGS22Q8NE09 1264 aa3.23□□□□□ -1.89
KCNIP4-IT1-201ENST00000627566 RAB3IPQ96QF0 476 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms