RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 SUPT20HL1Q3ZLR7 823 aa22.8■■□□□ 1.24
CNOT9-209ENST00000627282 ARMC9Q7Z3E5 817 aa22.8■■□□□ 1.24
CNOT9-209ENST00000627282 DDTLA6NHG4 134 aaPredicted RBP22.79■■□□□ 1.24
CNOT9-209ENST00000627282 EPB41L2O43491 1005 aaKnown RBP22.79■■□□□ 1.24
CNOT9-209ENST00000627282 NBPF12Q5TAG4 269 aaPredicted RBP22.79■■□□□ 1.24
CNOT9-209ENST00000627282 ZIC5Q96T25 663 aa22.79■■□□□ 1.24
CNOT9-209ENST00000627282 DCP1AQ9NPI6 582 aaPredicted RBP22.79■■□□□ 1.24
CNOT9-209ENST00000627282 CCDC171Q6TFL3 1326 aa22.79■■□□□ 1.24
CNOT9-209ENST00000627282 GSG1L2A8MUP6 293 aa22.79■■□□□ 1.24
CNOT9-209ENST00000627282 PRKG1Q13976 671 aa22.79■■□□□ 1.24
CNOT9-209ENST00000627282 RABEP1Q15276 862 aa22.79■■□□□ 1.24
CNOT9-209ENST00000627282 VPS53Q5VIR6 699 aa22.79■■□□□ 1.24
CNOT9-209ENST00000627282 RASAL3Q86YV0 1011 aa22.79■■□□□ 1.24
CNOT9-209ENST00000627282 EPB41L4AQ9HCS5 686 aaPredicted RBP22.79■■□□□ 1.24
CNOT9-209ENST00000627282 COL2A1P02458 1487 aaPredicted RBP22.78■■□□□ 1.24
CNOT9-209ENST00000627282 ATRNL1Q5VV63 1379 aa22.78■■□□□ 1.24
CNOT9-209ENST00000627282 GNAT2P19087 354 aa22.78■■□□□ 1.24
CNOT9-209ENST00000627282 ATP8A2Q9NTI2 1148 aa22.78■■□□□ 1.24
CNOT9-209ENST00000627282 SAP30BPQ9UHR5 308 aaKnown RBP22.78■■□□□ 1.24
CNOT9-209ENST00000627282 ANGEL1Q9UNK9 670 aaKnown RBP22.78■■□□□ 1.24
CNOT9-209ENST00000627282 DDX60LQ5H9U9 1706 aaKnown RBP22.77■■□□□ 1.24
CNOT9-209ENST00000627282 PPP1R12BO60237 982 aaPredicted RBP22.77■■□□□ 1.24
CNOT9-209ENST00000627282 CTCFP49711 727 aaPredicted RBP22.77■■□□□ 1.24
CNOT9-209ENST00000627282 MAP3K11Q16584 847 aa22.77■■□□□ 1.24
CNOT9-209ENST00000627282 LDLRAD1Q5T700 205 aa22.77■■□□□ 1.24
CNOT9-209ENST00000627282 BEGAINQ9BUH8 593 aa22.77■■□□□ 1.24
CNOT9-209ENST00000627282 PALD1Q9ULE6 856 aa22.77■■□□□ 1.24
CNOT9-209ENST00000627282 RAD50Q92878 1312 aa22.76■■□□□ 1.23
CNOT9-209ENST00000627282 SGSM2O43147 1006 aa22.76■■□□□ 1.23
CNOT9-209ENST00000627282 ZSCAN29Q8IWY8 852 aaPredicted RBP22.76■■□□□ 1.23
CNOT9-209ENST00000627282 FZD1Q9UP38 647 aa22.76■■□□□ 1.23
CNOT9-209ENST00000627282 NAV1Q8NEY1 1877 aa22.76■■□□□ 1.23
CNOT9-209ENST00000627282 BAZ2AQ9UIF9 1905 aaKnown RBP22.76■■□□□ 1.23
CNOT9-209ENST00000627282 PATL2C9JE40 543 aaKnown RBP22.75■■□□□ 1.23
CNOT9-209ENST00000627282 RUFY2Q8WXA3 655 aa22.75■■□□□ 1.23
CNOT9-209ENST00000627282 CSRNP1Q96S65 589 aa22.75■■□□□ 1.23
CNOT9-209ENST00000627282 MCM9Q9NXL9 1143 aa22.75■■□□□ 1.23
CNOT9-209ENST00000627282 MYH1P12882 1939 aa22.75■■□□□ 1.23
CNOT9-209ENST00000627282 KIF23Q02241 960 aaPredicted RBP22.75■■□□□ 1.23
CNOT9-209ENST00000627282 EVX2Q03828 476 aa22.75■■□□□ 1.23
CNOT9-209ENST00000627282 SLC4A8Q2Y0W8 1093 aa22.75■■□□□ 1.23
CNOT9-209ENST00000627282 APPP05067 770 aa22.74■■□□□ 1.23
CNOT9-209ENST00000627282 SLURP2P0DP57 97 aa22.74■■□□□ 1.23
CNOT9-209ENST00000627282 HSPD1P10809 573 aaKnown RBP22.74■■□□□ 1.23
CNOT9-209ENST00000627282 NBR1Q14596 966 aa22.74■■□□□ 1.23
CNOT9-209ENST00000627282 GIMAP6Q6P9H5 292 aa22.74■■□□□ 1.23
CNOT9-209ENST00000627282 IFNL3Q8IZI9 196 aa22.74■■□□□ 1.23
CNOT9-209ENST00000627282 DHX36Q9H2U1 1008 aaKnown RBP22.74■■□□□ 1.23
CNOT9-209ENST00000627282 CYP2D6P10635 497 aa22.73■■□□□ 1.23
CNOT9-209ENST00000627282 MCCP23508 829 aa22.73■■□□□ 1.23
CNOT9-209ENST00000627282 COL13A1Q5TAT6 717 aaPredicted RBP22.73■■□□□ 1.23
CNOT9-209ENST00000627282 ANO2Q9NQ90 1003 aa22.73■■□□□ 1.23
CNOT9-209ENST00000627282 SIPA1L1O43166 1804 aa22.73■■□□□ 1.23
CNOT9-209ENST00000627282 UNCXA6NJT0 531 aa22.72■■□□□ 1.23
CNOT9-209ENST00000627282 USP17L12C9JPN9 530 aa22.72■■□□□ 1.23
CNOT9-209ENST00000627282 USP17L21D6R901 530 aa22.72■■□□□ 1.23
CNOT9-209ENST00000627282 CA12O43570 354 aa22.72■■□□□ 1.23
CNOT9-209ENST00000627282 HSPA8P11142 646 aaKnown RBP22.72■■□□□ 1.23
CNOT9-209ENST00000627282 IREB2P48200 963 aaKnown RBP22.72■■□□□ 1.23
CNOT9-209ENST00000627282 CTR9Q6PD62 1173 aa22.72■■□□□ 1.23
CNOT9-209ENST00000627282 CYP2D7A0A087X1C5 515 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 SMIM22K7EJ46 135 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 USP2O75604 605 aaPredicted RBP22.71■■□□□ 1.23
CNOT9-209ENST00000627282 PLCD1P51178 756 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 IL17RAQ96F46 866 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 SLKQ9H2G2 1235 aaPredicted RBP22.71■■□□□ 1.23
CNOT9-209ENST00000627282 PI4KBQ9UBF8 816 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
CNOT9-209ENST00000627282 TDO2P48775 406 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 LBX1P52954 281 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 ANAPC15P60006 121 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 NACAP1Q9BZK3 213 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 PRDM10Q9NQV6 1147 aa22.71■■□□□ 1.23
CNOT9-209ENST00000627282 K7ELQ4 463 aaPredicted RBP22.7■■□□□ 1.22
CNOT9-209ENST00000627282 CD2BP2O95400 341 aaKnown RBP22.7■■□□□ 1.22
CNOT9-209ENST00000627282 MAP3K10Q02779 954 aa22.7■■□□□ 1.22
CNOT9-209ENST00000627282 ALX1Q15699 326 aa22.7■■□□□ 1.22
CNOT9-209ENST00000627282 C12orf60Q5U649 245 aa22.7■■□□□ 1.22
CNOT9-209ENST00000627282 REM2Q8IYK8 340 aaPredicted RBP22.7■■□□□ 1.22
CNOT9-209ENST00000627282 CLMNQ96JQ2 1002 aa22.7■■□□□ 1.22
CNOT9-209ENST00000627282 NAPBQ9H115 298 aa22.7■■□□□ 1.22
CNOT9-209ENST00000627282 FAM196BA6NMK8 535 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 FGAP02671 866 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 HLA-DOAP06340 250 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 PTH1RQ03431 593 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 SBK1Q52WX2 424 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 TTC6Q86TZ1 520 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 METTL16Q86W50 562 aaKnown RBP22.69■■□□□ 1.22
CNOT9-209ENST00000627282 SLC10A4Q96EP9 437 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 DSCC1Q9BVC3 393 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 DNAJC18Q9H819 358 aa22.69■■□□□ 1.22
CNOT9-209ENST00000627282 ARPP21Q9UBL0 812 aaPredicted RBP22.69■■□□□ 1.22
CNOT9-209ENST00000627282 ANKRD13AQ8IZ07 590 aa22.68■■□□□ 1.22
CNOT9-209ENST00000627282 HOOK2Q96ED9 719 aa22.68■■□□□ 1.22
CNOT9-209ENST00000627282 EHD4Q9H223 541 aa22.68■■□□□ 1.22
CNOT9-209ENST00000627282 TBC1D12O60347 775 aa22.68■■□□□ 1.22
CNOT9-209ENST00000627282 SPRYD7Q5W111 196 aa22.68■■□□□ 1.22
CNOT9-209ENST00000627282 DCAF15Q66K64 600 aa22.68■■□□□ 1.22
CNOT9-209ENST00000627282 FOXP4Q8IVH2 680 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms