RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 EXOSC6Q5RKV6 272 aaKnown RBP4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 HP1BP3Q5SSJ5 553 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 IGF2-ASQ6U949 168 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 HDXQ7Z353 690 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 RBBP8NLQ8NC74 664 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 C2CD4AQ8NCU7 369 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 MICAL1Q8TDZ2 1067 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 CPLX3Q8WVH0 158 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 TMEM40Q8WWA1 233 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 ACSF2Q96CM8 615 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 WNT10AQ9GZT5 417 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 GSX1Q9H4S2 264 aaPredicted RBP4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 FAM105AQ9NUU6 356 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 TJP2Q9UDY2 1190 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 STK17AQ9UEE5 414 aa4.28□□□□□ -1.72
SCARNA4-202ENST00000625402 UPK3BL1B0FP48 263 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 UPK3BL2E5RIL1 263 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 PGRP06401 933 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 SPATA31C1P0DKV0 1188 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 PLCG1P19174 1290 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 NOS3P29474 1203 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 POLR2BP30876 1174 aaKnown RBP4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 SOX4Q06945 474 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 BMS1Q14692 1282 aaKnown RBP4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 ZYXQ15942 572 aaKnown RBP4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 PRRT3Q5FWE3 981 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 TMEM201Q5SNT2 666 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 NUTM2GQ5VZR2 741 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 GIMAP6Q6P9H5 292 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 PODNQ7Z5L7 613 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 CKAP2LQ8IYA6 745 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 DCAF11Q8TEB1 546 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 ISL2Q96A47 359 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 DPH2Q9BQC3 489 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 HIRIP3Q9BW71 556 aaPredicted RBP4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 OSBPL2Q9H1P3 480 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 RAD18Q9NS91 495 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 NOP53Q9NZM5 478 aaKnown RBP4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 KLHL3Q9UH77 587 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 TACC3Q9Y6A5 838 aa4.27□□□□□ -1.73
SCARNA4-202ENST00000625402 SPDYE3A6NKU9 549 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 SLC22A31A6NKX4 558 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 B2RBV5 119 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 CHURC1-FNTBB4DL54 471 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 SLFN14P0C7P3 912 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 IMPDH2P12268 514 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 ETF1P62495 437 aaKnown RBP4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 RAB33AQ14088 237 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 SLBPQ14493 270 aaKnown RBP eCLIP4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 RASA3Q14644 834 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 MBTPS1Q14703 1052 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 ANKRD34AQ69YU3 496 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 DYMQ7RTS9 669 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 TMEM130Q8N3G9 435 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 RNF214Q8ND24 703 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 LENG1Q96BZ8 264 aaPredicted RBP4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 ATG4CQ96DT6 458 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 MEGF10Q96KG7 1140 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 ZSWIM4Q9H7M6 989 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 AKTIPQ9H8T0 292 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 GMIPQ9P107 970 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 ADAM30Q9UKF2 790 aa4.26□□□□□ -1.73
SCARNA4-202ENST00000625402 A0A1W2PQH9 124 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 FAM221BA6H8Z2 402 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 FAM86C2PA6NEL3 165 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 PIK3R2O00459 728 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 FANCGO15287 622 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 DYNC1LI2O43237 492 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 NME1P15531 152 aaKnown RBP4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 GLB1P16278 677 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 GUCY2CP25092 1073 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 CHRNA4P43681 627 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 PDE4BQ07343 736 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 ADGRE1Q14246 886 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 TNNI3KQ59H18 835 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 ARSHQ5FYA8 562 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 NBPF6Q5VWK0 638 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 MRM1Q6IN84 353 aaKnown RBP4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 FDX2Q6P4F2 183 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 NLRC3Q7RTR2 1065 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 TTC6Q86TZ1 520 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 JAZF1Q86VZ6 243 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 BEND7Q8N7W2 519 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 C19orf47Q8N9M1 422 aaKnown RBP4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 C12orf50Q8NA57 414 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 OR6P1Q8NGX9 317 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 TMEM87BQ96K49 555 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 NBPF4Q96M43 638 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 UBL7Q96S82 380 aaPredicted RBP4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 SLC9A7Q96T83 725 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 ATXN3LQ9H3M9 355 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 ACSS3Q9H6R3 686 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 CNNM2Q9H8M5 875 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 CYP4F12Q9HCS2 524 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 ACTR10Q9NZ32 417 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 USP21Q9UK80 565 aa4.25□□□□□ -1.73
SCARNA4-202ENST00000625402 LTBP3Q9NS15 1303 aa4.24□□□□□ -1.73
SCARNA4-202ENST00000625402 K7ELQ4 463 aaPredicted RBP4.24□□□□□ -1.73
SCARNA4-202ENST00000625402 TNFRSF10CO14798 259 aa4.24□□□□□ -1.73
SCARNA4-202ENST00000625402 RAB6AP20340 208 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms