RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 FNBP4Q8N3X1 1017 aaPredicted RBP17.49■□□□□ 0.39
LINC00552-201ENST00000625151 STK36Q9NRP7 1315 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 INTS13Q9NVM9 706 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 ZNF446Q9NWS9 450 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 SPATA31A6Q5VVP1 1343 aa17.49■□□□□ 0.39
LINC00552-201ENST00000625151 BTBD18B2RXH4 712 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 PATL2C9JE40 543 aaKnown RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 MBD4O95243 580 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 UQCRFS1P1P0C7P4 283 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 TOB1P50616 345 aaPredicted RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 ETF1P62495 437 aaKnown RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 GRIN1Q05586 938 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 DDB1Q16531 1140 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 NOSTRINQ8IVI9 506 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 MAGEB6Q8N7X4 407 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 KRI1Q8N9T8 703 aaKnown RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 MARCH10Q8NA82 808 aaPredicted RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 NAPBQ9H115 298 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 THRAP3Q9Y2W1 955 aaKnown RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 TIAM2Q8IVF5 1701 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 SNAP23O00161 211 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 FANCGO15287 622 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 KIF20AO95235 890 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 HSP90AA4PQ58FG1 418 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 TRIM65Q6PJ69 517 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 SLC4A9Q96Q91 983 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 UTP14AQ9BVJ6 771 aaKnown RBP17.48■□□□□ 0.39
LINC00552-201ENST00000625151 ARMT1Q9H993 441 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 FAM53CQ9NYF3 392 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 DNAI1Q9UI46 699 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 LRP5O75197 1615 aa17.48■□□□□ 0.39
LINC00552-201ENST00000625151 FGFR2P21802 821 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
LINC00552-201ENST00000625151 KRT222Q8N1A0 295 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 SPATA5Q8NB90 893 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 LPIN2Q92539 896 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 KCNJ14Q9UNX9 436 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 PDE8AO60658 829 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 MMP1P03956 469 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 TOP1P11387 765 aaKnown RBP17.47■□□□□ 0.39
LINC00552-201ENST00000625151 IFNAR1P17181 557 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 GABPB1Q06547 395 aaPredicted RBP17.47■□□□□ 0.39
LINC00552-201ENST00000625151 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 MYH6P13533 1939 aa17.47■□□□□ 0.39
LINC00552-201ENST00000625151 TUBB4AP04350 444 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 H2AFXP16104 143 aaPredicted RBP17.46■□□□□ 0.39
LINC00552-201ENST00000625151 TMEM139Q8IV31 216 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 REXO1L1PQ8IX06 675 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 DIS3L2Q8IYB7 885 aaKnown RBP17.46■□□□□ 0.39
LINC00552-201ENST00000625151 USP21Q9UK80 565 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 PHLPP2Q6ZVD8 1323 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 GSG1L2A8MUP6 293 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 CCP110O43303 1012 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 PRKAB2O43741 272 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
LINC00552-201ENST00000625151 VPS72Q15906 364 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 AKNAD1Q5T1N1 836 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
LINC00552-201ENST00000625151 PRR29P0C7W0 189 aa17.45■□□□□ 0.38
LINC00552-201ENST00000625151 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
LINC00552-201ENST00000625151 BARGINQ6ZT62 677 aa17.45■□□□□ 0.38
LINC00552-201ENST00000625151 CCDC82Q8N4S0 544 aa17.45■□□□□ 0.38
LINC00552-201ENST00000625151 FBXO2Q9UK22 296 aaPredicted RBP17.45■□□□□ 0.38
LINC00552-201ENST00000625151 MAN1B1Q9UKM7 699 aa17.45■□□□□ 0.38
LINC00552-201ENST00000625151 NID2Q14112 1375 aa17.45■□□□□ 0.38
LINC00552-201ENST00000625151 BCORQ6W2J9 1755 aa17.45■□□□□ 0.38
LINC00552-201ENST00000625151 SLFN14P0C7P3 912 aa17.45■□□□□ 0.38
LINC00552-201ENST00000625151 FMR1Q06787 632 aaKnown RBP eCLIP17.45■□□□□ 0.38
LINC00552-201ENST00000625151 CMTR1Q8N1G2 835 aaKnown RBP17.45■□□□□ 0.38
LINC00552-201ENST00000625151 MYO1BO43795 1136 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 MAP3K12Q12852 859 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 POSTNQ15063 836 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 MFSD6Q6ZSS7 791 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 CNNM2Q9H8M5 875 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 POLR2DO15514 142 aaKnown RBP17.44■□□□□ 0.38
LINC00552-201ENST00000625151 PTPREP23469 700 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 NR5A1Q13285 461 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 RTN1Q16799 776 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 WASF1Q92558 559 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 KRT23Q9C075 422 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 SERTAD1Q9UHV2 236 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 PCDHB6Q9Y5E3 794 aa17.44■□□□□ 0.38
LINC00552-201ENST00000625151 EP400Q96L91 3159 aa17.43■□□□□ 0.38
LINC00552-201ENST00000625151 TBX2Q13207 712 aaPredicted RBP17.43■□□□□ 0.38
LINC00552-201ENST00000625151 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00552-201ENST00000625151 MEX3CQ5U5Q3 659 aaKnown RBP17.43■□□□□ 0.38
LINC00552-201ENST00000625151 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
LINC00552-201ENST00000625151 ELOA2Q8IYF1 753 aaPredicted RBP17.43■□□□□ 0.38
LINC00552-201ENST00000625151 GRAMD1CQ8IYS0 662 aa17.43■□□□□ 0.38
LINC00552-201ENST00000625151 LCORLQ8N3X6 602 aa17.43■□□□□ 0.38
LINC00552-201ENST00000625151 TOMM22Q9NS69 142 aa17.43■□□□□ 0.38
LINC00552-201ENST00000625151 VWA3AA6NCI4 1184 aa17.43■□□□□ 0.38
LINC00552-201ENST00000625151 CLCN6P51797 869 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1064.7 ms