RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 LDHCP07864 332 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 MCM4P33991 863 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 PPARAQ07869 468 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 DIXDC1Q155Q3 683 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 MFSD14BQ5SR56 506 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 AKNAD1Q5T1N1 836 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 GIMAP6Q6P9H5 292 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 GTF3C6Q969F1 213 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 RTFDC1Q9BY42 306 aaPredicted RBP12.18□□□□□ -0.46
ATRX-216ENST00000624403 ANAPC4Q9UJX5 808 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
ATRX-216ENST00000624403 KIAA1551Q9HCM1 1747 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 MINDY4BA8MYZ0 360 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 PFKFB2O60825 505 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 BRD1O95696 1058 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 DPEP1P16444 411 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 GJB2P29033 226 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 PPP4CP60510 307 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 SH3RF3Q8TEJ3 882 aaPredicted RBP12.17□□□□□ -0.46
ATRX-216ENST00000624403 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 ZNF274Q96GC6 653 aaPredicted RBP12.17□□□□□ -0.46
ATRX-216ENST00000624403 GBP4Q96PP9 640 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 CNNM2Q9H8M5 875 aa12.17□□□□□ -0.46
ATRX-216ENST00000624403 CYP2D7A0A087X1C5 515 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 SMIM22K7EJ46 135 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 SH2B2O14492 632 aaPredicted RBP12.16□□□□□ -0.46
ATRX-216ENST00000624403 BAG3O95817 575 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 KCNA3P22001 575 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 PDIA3P30101 505 aaKnown RBP12.16□□□□□ -0.46
ATRX-216ENST00000624403 EVCP57679 992 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 SCRN1Q12765 414 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 FOXD4L5Q5VV16 416 aaPredicted RBP12.16□□□□□ -0.46
ATRX-216ENST00000624403 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 CLEC17AQ6ZS10 378 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 TTLL6Q8N841 843 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 FOXD4L4Q8WXT5 416 aaPredicted RBP12.16□□□□□ -0.46
ATRX-216ENST00000624403 NOL10Q9BSC4 688 aaKnown RBP12.16□□□□□ -0.46
ATRX-216ENST00000624403 KRT23Q9C075 422 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
ATRX-216ENST00000624403 DCP1AQ9NPI6 582 aaPredicted RBP12.16□□□□□ -0.46
ATRX-216ENST00000624403 ATP8A2Q9NTI2 1148 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 CCDC88AQ3V6T2 1871 aa12.16□□□□□ -0.46
ATRX-216ENST00000624403 DLEC1Q9Y238 1755 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 USP17L21D6R901 530 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 C21orf2O43822 256 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 KDM4AO75164 1064 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 BAG4O95429 457 aaKnown RBP12.15□□□□□ -0.46
ATRX-216ENST00000624403 CYP2D6P10635 497 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 BTDP43251 543 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 FOSBP53539 338 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.46
ATRX-216ENST00000624403 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
ATRX-216ENST00000624403 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 TMEM87BQ96K49 555 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 MXD3Q9BW11 206 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 DBNDD1Q9H9R9 158 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
ATRX-216ENST00000624403 SUGT1Q9Y2Z0 365 aa12.15□□□□□ -0.46
ATRX-216ENST00000624403 GAKO14976 1311 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
ATRX-216ENST00000624403 KLF18A0A0U1RQI7 1052 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 ECE2O60344 883 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 JAK2O60674 1132 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 SYT1P21579 422 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 POLD1P28340 1107 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 USP5P45974 858 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 CCT2P78371 535 aaKnown RBP12.14□□□□□ -0.47
ATRX-216ENST00000624403 AOC3Q16853 763 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 IGDCC4Q8TDY8 1250 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
ATRX-216ENST00000624403 TOMM22Q9NS69 142 aa12.14□□□□□ -0.47
ATRX-216ENST00000624403 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
ATRX-216ENST00000624403 ANGEL1Q9UNK9 670 aaKnown RBP12.14□□□□□ -0.47
ATRX-216ENST00000624403 DDX11L8A8MPP1 907 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 GOLGA8BA8MQT2 603 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
ATRX-216ENST00000624403 DPYSL4O14531 572 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 STX6O43752 255 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 CTDNEP1O95476 244 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 GRIPAP1Q4V328 841 aa12.13□□□□□ -0.47
ATRX-216ENST00000624403 CCDC93Q567U6 631 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms