RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 B4E1Z4 1266 aa21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 PCP11498 1178 aaKnown RBP21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 PDE4BQ07343 736 aa21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 TCEANC2Q96MN5 208 aa21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 ADARB2Q9NS39 739 aaKnown RBP21.07■□□□□ 0.96
PTCHD3-202ENST00000622555 ASTN2O75129 1339 aaPredicted RBP21.06■□□□□ 0.96
PTCHD3-202ENST00000622555 COL2A1P02458 1487 aaPredicted RBP21.06■□□□□ 0.96
PTCHD3-202ENST00000622555 SIPA1L1O43166 1804 aa21.06■□□□□ 0.96
PTCHD3-202ENST00000622555 SCN4AP35499 1836 aa21.06■□□□□ 0.96
PTCHD3-202ENST00000622555 DHX32Q7L7V1 743 aaKnown RBP21.06■□□□□ 0.96
PTCHD3-202ENST00000622555 MB21D2Q8IYB1 491 aaPredicted RBP21.06■□□□□ 0.96
PTCHD3-202ENST00000622555 HACL1Q9UJ83 578 aa21.06■□□□□ 0.96
PTCHD3-202ENST00000622555 CNTNAP1P78357 1384 aa21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 DDTLA6NHG4 134 aaPredicted RBP21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 PRDM1O75626 825 aa21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 SH3BP5LQ7L8J4 393 aa21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 IL27Q8NEV9 243 aa21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 FAM151AQ8WW52 585 aa21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 TTC14Q96N46 770 aa21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTCHD3-202ENST00000622555 ORC4O43929 436 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 KDM4AO75164 1064 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 CD2BP2O95400 341 aaKnown RBP21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 FGRP09769 529 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 MCM5P33992 734 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 TNNI2P48788 182 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 HIRAP54198 1017 aaPredicted RBP21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 TNFAIP1Q13829 316 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 C16orf86Q6ZW13 317 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 CHST3Q7LGC8 479 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 FAM83AQ86UY5 434 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 ATRNL1Q5VV63 1379 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 HSCBQ8IWL3 235 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 SLC44A5Q8NCS7 719 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 NKX2-3Q8TAU0 364 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 ESR2Q92731 530 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 SNX21Q969T3 373 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 MKNK2Q9HBH9 465 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 ZNF287Q9HBT7 754 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 PI4KBQ9UBF8 816 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 SERPINB13Q9UIV8 391 aa21.04■□□□□ 0.96
PTCHD3-202ENST00000622555 POLR2AP24928 1970 aaKnown RBP21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 WDR90Q96KV7 1748 aa21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 PRC1O43663 620 aa21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 RANBP6O60518 1105 aaKnown RBP21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 CDK8P49336 464 aa21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 EXOSC10Q01780 885 aaKnown RBP21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 ANGEL2Q5VTE6 544 aaKnown RBP21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 CYB5R4Q7L1T6 521 aa21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 LRRC2Q9BYS8 371 aa21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 TMEM39BQ9GZU3 492 aa21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 SCAF8Q9UPN6 1271 aaKnown RBP21.03■□□□□ 0.96
PTCHD3-202ENST00000622555 AK2P54819 239 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 ANTXR2P58335 489 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 FGD1P98174 961 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 BECN1Q14457 450 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 NOL8Q76FK4 1167 aaKnown RBP21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 CRACR2BQ8N4Y2 399 aaPredicted RBP21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 CSRNP1Q96S65 589 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 EHD4Q9H223 541 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 GGA3Q9NZ52 723 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 ZSWIM5Q9P217 1185 aa21.02■□□□□ 0.96
PTCHD3-202ENST00000622555 IQCA1LA6NCM1 817 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 EPHX2P34913 555 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 GABPAQ06546 454 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 RASA3Q14644 834 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 Q6ZUG5 572 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 APOBEC3FQ8IUX4 373 aaKnown RBP21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 TRIM34Q9BYJ4 488 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 TBC1D2Q9BYX2 928 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 WDR19Q8NEZ3 1342 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 SWAP70Q9UH65 585 aa21.01■□□□□ 0.95
PTCHD3-202ENST00000622555 MCM2P49736 904 aa21■□□□□ 0.95
PTCHD3-202ENST00000622555 FOXP4Q8IVH2 680 aaPredicted RBP21■□□□□ 0.95
PTCHD3-202ENST00000622555 ZNF444Q8N0Y2 327 aaPredicted RBP21■□□□□ 0.95
PTCHD3-202ENST00000622555 ALDH8A1Q9H2A2 487 aaPredicted RBP21■□□□□ 0.95
PTCHD3-202ENST00000622555 RASA1P20936 1047 aa20.99■□□□□ 0.95
PTCHD3-202ENST00000622555 ANKRD1Q15327 319 aa20.99■□□□□ 0.95
PTCHD3-202ENST00000622555 FAM47AQ5JRC9 791 aa20.99■□□□□ 0.95
PTCHD3-202ENST00000622555 USP50Q70EL3 339 aaPredicted RBP20.99■□□□□ 0.95
PTCHD3-202ENST00000622555 DEFB129Q9H1M3 183 aa20.99■□□□□ 0.95
PTCHD3-202ENST00000622555 TSPY2A6NKD2 308 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 TOB2Q14106 344 aaPredicted RBP20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 LARP6Q9BRS8 491 aaKnown RBP20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 TAF1DQ9H5J8 278 aaPredicted RBP20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 FAM196BA6NMK8 535 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 SLURP2P0DP57 97 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 NT5C2P49902 561 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 TFAP4Q01664 338 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 SART3Q15020 963 aaKnown RBP20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 CDAN1Q8IWY9 1227 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 BRF1Q92994 677 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 TMEM87BQ96K49 555 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 UBAC1Q9BSL1 405 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 DNAJC18Q9H819 358 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 TAOK2Q9UL54 1235 aa20.98■□□□□ 0.95
PTCHD3-202ENST00000622555 PITPNM2Q9BZ72 1349 aa20.97■□□□□ 0.95
PTCHD3-202ENST00000622555 POTECB2RU33 542 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms