RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 A0A0G2JLL6 359 aaPredicted RBP25■■□□□ 1.59
SMC6-210ENST00000621152 ECM2O94769 699 aaPredicted RBP25■■□□□ 1.59
SMC6-210ENST00000621152 IFIT2P09913 472 aaKnown RBP25■■□□□ 1.59
SMC6-210ENST00000621152 MAP3K12Q12852 859 aa25■■□□□ 1.59
SMC6-210ENST00000621152 GADL1Q6ZQY3 521 aa25■■□□□ 1.59
SMC6-210ENST00000621152 PRRT2Q7Z6L0 340 aaPredicted RBP25■■□□□ 1.59
SMC6-210ENST00000621152 ARHGAP39Q9C0H5 1083 aa25■■□□□ 1.59
SMC6-210ENST00000621152 TRIM75PA6NK02 468 aa24.99■■□□□ 1.59
SMC6-210ENST00000621152 LACTBP83111 547 aaPredicted RBP24.99■■□□□ 1.59
SMC6-210ENST00000621152 FOXP4Q8IVH2 680 aaPredicted RBP24.99■■□□□ 1.59
SMC6-210ENST00000621152 MIGA1Q8NAN2 632 aa24.99■■□□□ 1.59
SMC6-210ENST00000621152 HERC5Q9UII4 1024 aaKnown RBP24.99■■□□□ 1.59
SMC6-210ENST00000621152 DOCK2Q92608 1830 aa24.98■■□□□ 1.59
SMC6-210ENST00000621152 CAP2P40123 477 aa24.98■■□□□ 1.59
SMC6-210ENST00000621152 RRP1BQ14684 758 aaKnown RBP24.98■■□□□ 1.59
SMC6-210ENST00000621152 PALD1Q9ULE6 856 aa24.98■■□□□ 1.59
SMC6-210ENST00000621152 COL2A1P02458 1487 aaPredicted RBP24.97■■□□□ 1.59
SMC6-210ENST00000621152 FLT1P17948 1338 aa24.97■■□□□ 1.59
SMC6-210ENST00000621152 CYP2C8P10632 490 aa24.97■■□□□ 1.59
SMC6-210ENST00000621152 PARK7Q99497 189 aaKnown RBP24.97■■□□□ 1.59
SMC6-210ENST00000621152 SAP30BPQ9UHR5 308 aaKnown RBP24.97■■□□□ 1.59
SMC6-210ENST00000621152 SPP2Q13103 211 aa24.96■■□□□ 1.59
SMC6-210ENST00000621152 TTF1Q15361 905 aaPredicted RBP24.96■■□□□ 1.59
SMC6-210ENST00000621152 CRACR2BQ8N4Y2 399 aaPredicted RBP24.96■■□□□ 1.59
SMC6-210ENST00000621152 PTCH2Q9Y6C5 1203 aa24.96■■□□□ 1.59
SMC6-210ENST00000621152 USP5P45974 858 aa24.95■■□□□ 1.58
SMC6-210ENST00000621152 TRIM34Q9BYJ4 488 aa24.95■■□□□ 1.58
SMC6-210ENST00000621152 ADGRA2Q96PE1 1338 aa24.94■■□□□ 1.58
SMC6-210ENST00000621152 USP17L5A8MUK1 530 aa24.94■■□□□ 1.58
SMC6-210ENST00000621152 GNRH1P01148 92 aa24.94■■□□□ 1.58
SMC6-210ENST00000621152 PSMC4P43686 418 aa24.94■■□□□ 1.58
SMC6-210ENST00000621152 CERS3Q8IU89 383 aa24.94■■□□□ 1.58
SMC6-210ENST00000621152 ZNF280CQ8ND82 737 aa24.94■■□□□ 1.58
SMC6-210ENST00000621152 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.94■■□□□ 1.58
SMC6-210ENST00000621152 ARMC5Q96C12 935 aa24.94■■□□□ 1.58
SMC6-210ENST00000621152 DNAJC2Q99543 621 aaKnown RBP24.94■■□□□ 1.58
SMC6-210ENST00000621152 FMNL1O95466 1100 aaPredicted RBP24.93■■□□□ 1.58
SMC6-210ENST00000621152 SLC4A8Q2Y0W8 1093 aa24.93■■□□□ 1.58
SMC6-210ENST00000621152 TMED8Q6PL24 325 aaPredicted RBP24.93■■□□□ 1.58
SMC6-210ENST00000621152 NBPF11Q86T75 865 aa24.93■■□□□ 1.58
SMC6-210ENST00000621152 METTL16Q86W50 562 aaKnown RBP24.93■■□□□ 1.58
SMC6-210ENST00000621152 SLC45A1Q9Y2W3 748 aa24.93■■□□□ 1.58
SMC6-210ENST00000621152 GOLIM4O00461 696 aa24.92■■□□□ 1.58
SMC6-210ENST00000621152 HLA-DOAP06340 250 aa24.92■■□□□ 1.58
SMC6-210ENST00000621152 CTGFP29279 349 aa24.92■■□□□ 1.58
SMC6-210ENST00000621152 SLC9C1Q4G0N8 1177 aa24.92■■□□□ 1.58
SMC6-210ENST00000621152 SLC9C2Q5TAH2 1124 aa24.92■■□□□ 1.58
SMC6-210ENST00000621152 TBC1D2Q9BYX2 928 aa24.92■■□□□ 1.58
SMC6-210ENST00000621152 MYO5AQ9Y4I1 1855 aaKnown RBP24.92■■□□□ 1.58
SMC6-210ENST00000621152 BCRP11274 1271 aa24.91■■□□□ 1.58
SMC6-210ENST00000621152 HOXD10P28358 340 aa24.91■■□□□ 1.58
SMC6-210ENST00000621152 TRIM47Q96LD4 638 aa24.91■■□□□ 1.58
SMC6-210ENST00000621152 BOLA2Q9H3K6 86 aa24.91■■□□□ 1.58
SMC6-210ENST00000621152 AS3MTQ9HBK9 375 aa24.91■■□□□ 1.58
SMC6-210ENST00000621152 AGTPBP1Q9UPW5 1226 aa24.91■■□□□ 1.58
SMC6-210ENST00000621152 MAGEB6P1A0A0J9YX57 407 aa24.9■■□□□ 1.58
SMC6-210ENST00000621152 POTEFA5A3E0 1075 aa24.9■■□□□ 1.58
SMC6-210ENST00000621152 PRMT2P55345 433 aa24.9■■□□□ 1.58
SMC6-210ENST00000621152 JAG1P78504 1218 aa24.9■■□□□ 1.58
SMC6-210ENST00000621152 TREML2Q5T2D2 321 aa24.9■■□□□ 1.58
SMC6-210ENST00000621152 DNAJC18Q9H819 358 aa24.9■■□□□ 1.58
SMC6-210ENST00000621152 ASNSP08243 561 aa24.89■■□□□ 1.58
SMC6-210ENST00000621152 PDE6AP16499 860 aa24.89■■□□□ 1.58
SMC6-210ENST00000621152 HMGCS2P54868 508 aa24.89■■□□□ 1.58
SMC6-210ENST00000621152 PROCA1Q8NCQ7 364 aaPredicted RBP24.89■■□□□ 1.58
SMC6-210ENST00000621152 SMCR8Q8TEV9 937 aaPredicted RBP24.89■■□□□ 1.58
SMC6-210ENST00000621152 EDC3Q96F86 508 aaKnown RBP24.89■■□□□ 1.58
SMC6-210ENST00000621152 RIOK1Q9BRS2 568 aaKnown RBP24.89■■□□□ 1.58
SMC6-210ENST00000621152 TMEM106CQ9BVX2 250 aa24.89■■□□□ 1.58
SMC6-210ENST00000621152 LRRCC1Q9C099 1032 aa24.89■■□□□ 1.58
SMC6-210ENST00000621152 SRRDQ9UH36 339 aa24.89■■□□□ 1.58
SMC6-210ENST00000621152 MAST2Q6P0Q8 1798 aa24.88■■□□□ 1.57
SMC6-210ENST00000621152 DOCK1Q14185 1865 aa24.88■■□□□ 1.57
SMC6-210ENST00000621152 SMARCA5O60264 1052 aaPredicted RBP24.88■■□□□ 1.57
SMC6-210ENST00000621152 ATP5JP18859 108 aa24.88■■□□□ 1.57
SMC6-210ENST00000621152 OSBPP22059 807 aa24.88■■□□□ 1.57
SMC6-210ENST00000621152 ZNF333Q96JL9 665 aa24.88■■□□□ 1.57
SMC6-210ENST00000621152 WDR18Q9BV38 432 aa24.88■■□□□ 1.57
SMC6-210ENST00000621152 ZNF532Q9HCE3 1301 aa24.87■■□□□ 1.57
SMC6-210ENST00000621152 GDF11O95390 407 aa24.87■■□□□ 1.57
SMC6-210ENST00000621152 MYCP01106 439 aaPredicted RBP24.87■■□□□ 1.57
SMC6-210ENST00000621152 TTC6Q86TZ1 520 aa24.87■■□□□ 1.57
SMC6-210ENST00000621152 SH3TC2Q8TF17 1288 aa24.87■■□□□ 1.57
SMC6-210ENST00000621152 GINM1Q9NU53 330 aa24.87■■□□□ 1.57
SMC6-210ENST00000621152 PAG1Q9NWQ8 432 aa24.87■■□□□ 1.57
SMC6-210ENST00000621152 FCGRTP55899 365 aa24.86■■□□□ 1.57
SMC6-210ENST00000621152 SHROOM1Q2M3G4 852 aaPredicted RBP24.86■■□□□ 1.57
SMC6-210ENST00000621152 SH3D19Q5HYK7 790 aa24.86■■□□□ 1.57
SMC6-210ENST00000621152 PNMA3Q9UL41 463 aa24.86■■□□□ 1.57
SMC6-210ENST00000621152 EN2P19622 333 aaPredicted RBP24.85■■□□□ 1.57
SMC6-210ENST00000621152 BACE1P56817 501 aa24.85■■□□□ 1.57
SMC6-210ENST00000621152 PABPC4Q13310 644 aaKnown RBP eCLIP24.85■■□□□ 1.57
SMC6-210ENST00000621152 RAET1EQ8TD07 263 aa24.85■■□□□ 1.57
SMC6-210ENST00000621152 HAUS7Q99871 368 aa24.85■■□□□ 1.57
SMC6-210ENST00000621152 CRNKL1Q9BZJ0 848 aaKnown RBP24.85■■□□□ 1.57
SMC6-210ENST00000621152 SERPINB13Q9UIV8 391 aa24.85■■□□□ 1.57
SMC6-210ENST00000621152 PHIPQ8WWQ0 1821 aa24.84■■□□□ 1.57
SMC6-210ENST00000621152 TCRBV5S4A2TA0A5A2 114 aa24.84■■□□□ 1.57
SMC6-210ENST00000621152 POLR3DP05423 398 aaPredicted RBP24.84■■□□□ 1.57
SMC6-210ENST00000621152 MTMR2Q13614 643 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms