RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 WDR18Q9BV38 432 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 MCOLN1Q9GZU1 580 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 TBC1D2BQ9UPU7 963 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 FCF1Q9Y324 198 aaKnown RBP6.84□□□□□ -1.31
CBWD3-215ENST00000619322 LILRB3O75022 631 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 SASH1O94885 1247 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 GTF2A2P52657 109 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 HDGFL1Q5TGJ6 251 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 PRR7Q8TB68 274 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 USP6NLQ92738 828 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 SNRKQ9NRH2 765 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 ZNF277Q9NRM2 450 aaPredicted RBP6.84□□□□□ -1.31
CBWD3-215ENST00000619322 MYH4Q9Y623 1939 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 FKTNO75072 461 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 COPB2P35606 906 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 DCPSQ96C86 337 aaKnown RBP6.84□□□□□ -1.31
CBWD3-215ENST00000619322 CHPF2Q9P2E5 772 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 PTPN22Q9Y2R2 807 aa6.84□□□□□ -1.31
CBWD3-215ENST00000619322 XRCC5P13010 732 aaKnown RBP6.83□□□□□ -1.32
CBWD3-215ENST00000619322 MAP3K21Q5TCX8 1036 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 A0A0G2JLL6 359 aaPredicted RBP6.83□□□□□ -1.32
CBWD3-215ENST00000619322 GPR37L1O60883 481 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 NOVP48745 357 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 MLLT1Q03111 559 aaPredicted RBP6.83□□□□□ -1.32
CBWD3-215ENST00000619322 KCNC4Q03721 635 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 PROSER3Q2NL68 480 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 PRRT2Q7Z6L0 340 aaPredicted RBP6.83□□□□□ -1.32
CBWD3-215ENST00000619322 CSRNP1Q96S65 589 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 IL21Q9HBE4 155 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 NOP58Q9Y2X3 529 aaKnown RBP6.83□□□□□ -1.32
CBWD3-215ENST00000619322 BCRP11274 1271 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 HOXA7P31268 230 aaPredicted RBP6.83□□□□□ -1.32
CBWD3-215ENST00000619322 EPS15P42566 896 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 MTMR2Q13614 643 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 OTUD7BQ6GQQ9 843 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 ANKRD13AQ8IZ07 590 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 ABRAQ8N0Z2 381 aa6.83□□□□□ -1.32
CBWD3-215ENST00000619322 ZNF622Q969S3 477 aaKnown RBP eCLIP6.83□□□□□ -1.32
CBWD3-215ENST00000619322 ATG2AQ2TAZ0 1938 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 PRAMEF22A3QJZ6 481 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 E9PSI1 815 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
CBWD3-215ENST00000619322 AOC3Q16853 763 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 C17orf99Q6UX52 265 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 ANKRD44Q8N8A2 993 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 SHCBP1Q8NEM2 672 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 DNAAF4Q8WXU2 420 aa6.82□□□□□ -1.32
CBWD3-215ENST00000619322 GPR101Q96P66 508 aaPredicted RBP6.82□□□□□ -1.32
CBWD3-215ENST00000619322 USB1Q9BQ65 265 aaKnown RBP6.82□□□□□ -1.32
CBWD3-215ENST00000619322 PLA2G6O60733 806 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 COL6A1P12109 1028 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 RFC5P40937 340 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 TNNI2P48788 182 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 ERICH6BQ5W0A0 696 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 FAM151AQ8WW52 585 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 CD209Q9NNX6 404 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 PTPRSQ13332 1948 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 KIAA1217Q5T5P2 1943 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 NF2P35240 595 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 IREB2P48200 963 aaKnown RBP6.81□□□□□ -1.32
CBWD3-215ENST00000619322 CELF1Q92879 486 aaKnown RBP6.81□□□□□ -1.32
CBWD3-215ENST00000619322 PAK6Q9NQU5 681 aaPredicted RBP6.81□□□□□ -1.32
CBWD3-215ENST00000619322 ZNFX1Q9P2E3 1918 aaKnown RBP6.81□□□□□ -1.32
CBWD3-215ENST00000619322 NEXNQ0ZGT2 675 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 DCAF15Q66K64 600 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 WDR66Q8TBY9 1149 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 POM121Q96HA1 1249 aa6.81□□□□□ -1.32
CBWD3-215ENST00000619322 TRMT112Q9UI30 125 aaKnown RBP6.81□□□□□ -1.32
CBWD3-215ENST00000619322 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
CBWD3-215ENST00000619322 DENND4AQ7Z401 1863 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 ANKRD18BA2A2Z9 1011 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 GPR25O00155 361 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 WNT10BO00744 389 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 ADH1BP00325 375 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 CETPP11597 493 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 POU3F3P20264 500 aaPredicted RBP6.8□□□□□ -1.32
CBWD3-215ENST00000619322 SCARF1Q14162 830 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 KAZALD1Q96I82 304 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 BRPF3Q9ULD4 1205 aa6.8□□□□□ -1.32
CBWD3-215ENST00000619322 USP2O75604 605 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-215ENST00000619322 SLC4A3P48751 1232 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 GHRHRQ02643 423 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 FLIIQ13045 1269 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 CC2D1BQ5T0F9 858 aaKnown RBP6.79□□□□□ -1.32
CBWD3-215ENST00000619322 ERO1BQ86YB8 467 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 DIS3Q9Y2L1 958 aaKnown RBP6.79□□□□□ -1.32
CBWD3-215ENST00000619322 PHF20L1A8MW92 1017 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 GRM8O00222 908 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 AP1G2O75843 785 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 IGHMBP2P38935 993 aaKnown RBP6.79□□□□□ -1.32
CBWD3-215ENST00000619322 OLFML2BQ68BL8 750 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 RCSD1Q6JBY9 416 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 SAMD3Q8N6K7 520 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 HERC5Q9UII4 1024 aaKnown RBP6.79□□□□□ -1.32
CBWD3-215ENST00000619322 GCLCP48506 637 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-215ENST00000619322 KIF23Q02241 960 aaPredicted RBP6.79□□□□□ -1.32
CBWD3-215ENST00000619322 LRIT3Q3SXY7 679 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 LIAT1Q6ZQX7 453 aa6.79□□□□□ -1.32
CBWD3-215ENST00000619322 CCDC24Q8N4L8 307 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms