RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	MKL2	Q9ULH7	1088 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MORC2	Q9Y6X9	1032 aa	Predicted RBP	4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	LAMB1	P07942	1786 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ALS2	Q96Q42	1657 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	KRT38	O76015	456 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	OAS2	P29728	719 aa	Known RBP	4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	CDC27	P30260	824 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	IRX1	P78414	480 aa	Predicted RBP	4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SFSWAP	Q12872	951 aa	Known RBP	4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	C6orf132	Q5T0Z8	1188 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	CYP26C1	Q6V0L0	522 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	DEFB132	Q7Z7B7	95 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	LRRC49	Q8IUZ0	686 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	METRN	Q9UJH8	293 aa		4.75	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PLIN1	O60240	522 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	XRCC5	P13010	732 aa	Known RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PLCG2	P16885	1265 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ZNF76	P36508	570 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	LMNB2	Q03252	620 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SEPT7	Q16181	437 aa	Known RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ANKRD18A	Q8IVF6	992 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	LILRB2	Q8N423	598 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SPIRE2	Q8WWL2	714 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SH3KBP1	Q96B97	665 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SNX27	Q96L92	541 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	FEZ1	Q99689	392 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MAK16	Q9BXY0	300 aa	Known RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	UNC45A	Q9H3U1	944 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	EPS15L1	Q9UBC2	864 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	FMN2	Q9NZ56	1722 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	CDKL5	O76039	1030 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MYL3	P08590	195 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	HOXB3	P14651	431 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PLEKHG4	Q58EX7	1191 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ERAP2	Q6P179	960 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	WDR66	Q8TBY9	1149 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MAML1	Q92585	1016 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	FRAT1	Q92837	279 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	UTP14A	Q9BVJ6	771 aa	Known RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	YIPF2	Q9BWQ6	316 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TRIM7	Q9C029	511 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	NGRN	Q9NPE2	291 aa	Known RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	COL18A1	P39060	1754 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ATP7B	P35670	1465 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SLC26A4	O43511	780 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	CCNC	P24863	283 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PDE4B	Q07343	736 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	BIRC3	Q13489	604 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SPECC1	Q5M775	1068 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	IRGC	Q6NXR0	463 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	POTEE	Q6S8J3	1075 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MYRIP	Q8NFW9	859 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	N4BP2L2	Q92802	583 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.74	□□□□□ -1.65	1e-12	■■■□□ 15.4
UBE2D3-233	ENST00000618836	PTPRH	Q9HD43	1115 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	EVL	Q9UI08	416 aa	Predicted RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	NOSIP	Q9Y314	301 aa	Known RBP	4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TMEM2	Q9UHN6	1383 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PLEKHG1	Q9ULL1	1385 aa		4.74	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ARHGAP5	Q13017	1502 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836		A0A0B4J203	849 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836		H0Y3Z8	333 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	HSPA5	P11021	654 aa	Known RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MYCLP1	P12525	358 aa	Predicted RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	GYS1	P13807	737 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	IDE	P14735	1019 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	COPA	P53621	1224 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MECOM	Q03112	1051 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TOMM20	Q15388	145 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	NFE2	Q16621	373 aa	Predicted RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MUM1	Q2TAK8	710 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	FIP1L1	Q6UN15	594 aa	Known RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	UNC5D	Q6UXZ4	953 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	EFCAB13	Q8IY85	973 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ZNF454	Q8N9F8	522 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	LRRN4	Q8WUT4	740 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PLEKHG4B	Q96PX9	1271 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	SLC7A5P2	Q9GIP4	190 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TMX1	Q9H3N1	280 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	IRAK4	Q9NWZ3	460 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TBC1D7	Q9P0N9	293 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	FBXO2	Q9UK22	296 aa	Predicted RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	INTU	Q9ULD6	942 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ATP8A1	Q9Y2Q0	1164 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TSPY4	P0CV99	314 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	TSPY10	P0CW01	314 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	CAP2	P40123	477 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	GEMIN4	P57678	1058 aa	Known RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	RABL6	Q3YEC7	729 aa	Predicted RBP	4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	MCTP2	Q6DN12	878 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	B4GALNT3	Q6L9W6	998 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PPP1R18	Q6NYC8	613 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	ZNF449	Q6P9G9	518 aa		4.73	□□□□□ -1.65
UBE2D3-233	ENST00000618836	PODN	Q7Z5L7	613 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms