RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 NBPF11Q86T75 865 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 DBNDD2Q9BQY9 259 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 C6orf229H3BNL8 230 aa25.26■■□□□ 1.63
POLR2J3-220ENST00000613744 KINO60870 393 aaKnown RBP25.26■■□□□ 1.63
POLR2J3-220ENST00000613744 AKAP2Q9Y2D5 859 aa25.26■■□□□ 1.63
POLR2J3-220ENST00000613744 SFPQP23246 707 aaKnown RBP eCLIP25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 KRT32Q14532 448 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 CCAR1Q8IX12 1150 aaKnown RBP25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 GGA1Q9UJY5 639 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 ZNF804BA4D1E1 1349 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 LRRC37AA6NMS7 1700 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 FGFR2P21802 821 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 FAM160A1Q05DH4 1040 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 TBC1D16Q8TBP0 767 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 ZNF609O15014 1411 aa25.25■■□□□ 1.63
POLR2J3-220ENST00000613744 NAA16Q6N069 864 aaPredicted RBP25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 TXNRD3Q86VQ6 643 aa25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 DNAI1Q9UI46 699 aa25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 TADA3O75528 432 aa25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 MNS1Q8NEH6 495 aa25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 ENGASEQ8NFI3 743 aa25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 LPIN2Q92539 896 aa25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 XAGE2Q96GT9 111 aa25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 LLPHQ9BRT6 129 aaKnown RBP25.24■■□□□ 1.63
POLR2J3-220ENST00000613744 H3BQV1 296 aa25.23■■□□□ 1.63
POLR2J3-220ENST00000613744 IFFO2Q5TF58 517 aa25.23■■□□□ 1.63
POLR2J3-220ENST00000613744 BRF1Q92994 677 aa25.23■■□□□ 1.63
POLR2J3-220ENST00000613744 YY1AP1Q9H869 796 aa25.23■■□□□ 1.63
POLR2J3-220ENST00000613744 GPR108Q9NPR9 543 aa25.23■■□□□ 1.63
POLR2J3-220ENST00000613744 RIMBP2O15034 1052 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 SLC5A1P13866 664 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 LRRFIP1Q32MZ4 808 aaKnown RBP25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 FCHSD1Q86WN1 690 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 AOPEPQ8N6M6 819 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 IQUBQ8NA54 791 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 IFIT1P09914 478 aaKnown RBP25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 GYG1P46976 350 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 UBE4AQ14139 1066 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 ZNF396Q96N95 335 aaPredicted RBP25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 LEMD3Q9Y2U8 911 aa25.22■■□□□ 1.63
POLR2J3-220ENST00000613744 MED23Q9ULK4 1368 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 ATP2B4P23634 1241 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 ADD1P35611 737 aaKnown RBP25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 GORABQ5T7V8 394 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 ARMCX5Q6P1M9 558 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 KRBA2Q6ZNG9 492 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 GOLGA5Q8TBA6 731 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 DTNBO60941 627 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 BCAMP50895 628 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 EXOC4Q96A65 974 aa25.21■■□□□ 1.63
POLR2J3-220ENST00000613744 DUOX1Q9NRD9 1551 aa25.2■■□□□ 1.62
POLR2J3-220ENST00000613744 YBX3P16989 372 aaKnown RBP eCLIP25.2■■□□□ 1.62
POLR2J3-220ENST00000613744 IRX3P78415 501 aaPredicted RBP25.2■■□□□ 1.62
POLR2J3-220ENST00000613744 LRRN4CLQ8ND94 238 aa25.2■■□□□ 1.62
POLR2J3-220ENST00000613744 NEK11Q8NG66 645 aa25.2■■□□□ 1.62
POLR2J3-220ENST00000613744 BOLA2Q9H3K6 86 aa25.2■■□□□ 1.62
POLR2J3-220ENST00000613744 NMIQ13287 307 aaPredicted RBP25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 ZSCAN26Q16670 478 aa25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 GPR161Q8N6U8 529 aaKnown RBP25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 SMARCC2Q8TAQ2 1214 aa25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 LTBP1Q14766 1721 aa25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 TNNT3P45378 269 aaPredicted RBP25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 CC2D2BQ6DHV5 1058 aa25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 HOMER1Q86YM7 354 aa25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 IQSEC3Q9UPP2 1182 aaPredicted RBP25.19■■□□□ 1.62
POLR2J3-220ENST00000613744 OAS2P29728 719 aaKnown RBP25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 PHKA1P46020 1223 aa25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 RTKN2Q8IZC4 609 aa25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 PLCD3Q8N3E9 789 aa25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 FBXO18Q8NFZ0 1043 aa25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 SMARCE1Q969G3 411 aa25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 GOLPH3LQ9H4A5 285 aa25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 SNED1Q8TER0 1413 aa25.18■■□□□ 1.62
POLR2J3-220ENST00000613744 POLR3GO15318 223 aaPredicted RBP25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 JAKMIP3Q5VZ66 844 aa25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 ZNF277Q9NRM2 450 aaPredicted RBP25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 TBC1D8O95759 1140 aa25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 WASHC4Q2M389 1173 aa25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 CC2D1AQ6P1N0 951 aaPredicted RBP25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 TMC6Q7Z403 805 aa25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 FAM84BQ96KN1 310 aaPredicted RBP25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 NDUFB9Q9Y6M9 179 aa25.17■■□□□ 1.62
POLR2J3-220ENST00000613744 RASSF7Q02833 373 aa25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 SMC1AQ14683 1233 aaKnown RBP25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 SOGA3Q5TF21 947 aa25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 CCDC102BQ68D86 513 aa25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 XPO4Q9C0E2 1151 aaKnown RBP25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 AOC3Q16853 763 aa25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 TRIM65Q6PJ69 517 aa25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 ARHGAP27Q6ZUM4 889 aa25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 VPS37DQ86XT2 251 aa25.16■■□□□ 1.62
POLR2J3-220ENST00000613744 IRS2Q9Y4H2 1338 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 A0A1W2PQ27 194 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 A0A1W2PQ64 194 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 A0A1W2PQD8 194 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 MYO1CO00159 1063 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 NFKBIEO00221 500 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 CASQ1P31415 396 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 DOK7Q18PE1 504 aa25.15■■□□□ 1.62
POLR2J3-220ENST00000613744 TRERF1Q96PN7 1200 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms