RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
PPARGC1A-216ENST00000612355 TBC1D12O60347 775 aa12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 CCDC84Q86UT8 332 aaPredicted RBP12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 TBC1D2Q9BYX2 928 aa12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 DDX4Q9NQI0 724 aaKnown RBP12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 RLFQ13129 1914 aa12.33□□□□□ -0.44
PPARGC1A-216ENST00000612355 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 EYA2O00167 538 aa12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 SEMA3EO15041 775 aa12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 SLURP2P0DP57 97 aa12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 RFX5P48382 616 aaPredicted RBP12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 PABPC4Q13310 644 aaKnown RBP eCLIP12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 LRRC26Q2I0M4 334 aa12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 FAM163AQ96GL9 167 aaPredicted RBP12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
PPARGC1A-216ENST00000612355 HMGCS2P54868 508 aa12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 ZNF697Q5TEC3 545 aa12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 LHX8Q68G74 356 aa12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 ZSCAN29Q8IWY8 852 aaPredicted RBP12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 ZNF280CQ8ND82 737 aa12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 OSBPL5Q9H0X9 879 aaPredicted RBP12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 DENND2AQ9ULE3 1009 aa12.31□□□□□ -0.44
PPARGC1A-216ENST00000612355 CACNB2Q08289 660 aaPredicted RBP12.3□□□□□ -0.44
PPARGC1A-216ENST00000612355 SPP2Q13103 211 aa12.3□□□□□ -0.44
PPARGC1A-216ENST00000612355 ZGPATQ8N5A5 531 aaKnown RBP12.3□□□□□ -0.44
PPARGC1A-216ENST00000612355 USP6NLQ92738 828 aa12.3□□□□□ -0.44
PPARGC1A-216ENST00000612355 GNL3LQ9NVN8 582 aaKnown RBP12.3□□□□□ -0.44
PPARGC1A-216ENST00000612355 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
PPARGC1A-216ENST00000612355 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 PIEZO1Q92508 2521 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 CYP2B6P20813 491 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 RHBDL3P58872 404 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 FAM161BQ96MY7 647 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 FOCADQ5VW36 1801 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 MROH7-TTC4A0A0A0MT08 1334 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
PPARGC1A-216ENST00000612355 CIAO1O76071 339 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 CAP2P40123 477 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 PHKA1P46020 1223 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 PICALMQ13492 652 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 ATP2B3Q16720 1220 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 CCDC184Q52MB2 194 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 SLF2Q8IX21 1173 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 USP44Q9H0E7 712 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 TXNRD2Q9NNW7 524 aa12.28□□□□□ -0.44
PPARGC1A-216ENST00000612355 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 MAP4K4O95819 1239 aaPredicted RBP12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 MAPK4P31152 587 aa12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 BTDP43251 543 aa12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 PDE3AQ14432 1141 aa12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 MORN1Q5T089 497 aa12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 DZIP1Q86YF9 867 aaKnown RBP12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 APBA2Q99767 749 aa12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 LBHD1Q9BQE6 289 aaPredicted RBP12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.27□□□□□ -0.45
PPARGC1A-216ENST00000612355 FAM196BA6NMK8 535 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 RGS2P41220 211 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 HERVK_113P62684 666 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 IRX3P78415 501 aaPredicted RBP12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 RASGRF1Q13972 1273 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 GPRC5AQ8NFJ5 357 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 ZNF384Q8TF68 577 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 WDR18Q9BV38 432 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 SEMA6BQ9H3T3 888 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 AS3MTQ9HBK9 375 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 PTPRCP08575 1304 aa12.26□□□□□ -0.45
PPARGC1A-216ENST00000612355 BACE1P56817 501 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 ERVK-9P63128 1117 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 ERVK-24P63145 666 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 CCL14Q16627 93 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 CCDC102BQ68D86 513 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 GPR142Q7Z601 462 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 GTF3C2Q8WUA4 911 aaPredicted RBP12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 PORCNQ9H237 461 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 TTYH1Q9H313 450 aaPredicted RBP12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 CEP126Q9P2H0 1117 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 HERC5Q9UII4 1024 aaKnown RBP12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 ZNF236Q9UL36 1845 aa12.25□□□□□ -0.45
PPARGC1A-216ENST00000612355 PEX10O60683 326 aa12.24□□□□□ -0.45
PPARGC1A-216ENST00000612355 SMAD3P84022 425 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms