RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ADGRB2O60241 1585 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
TCF3-220ENST00000611869 SCARF1Q14162 830 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 SKIDA1Q1XH10 827 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 PPP4R3BQ5MIZ7 849 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 TCERG1LQ5VWI1 586 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 CTAGE1Q96RT6 745 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 MED23Q9ULK4 1368 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 ATG9AQ7Z3C6 839 aa14.93□□□□□ -0.02
TCF3-220ENST00000611869 ZSCAN10Q96SZ4 725 aaPredicted RBP14.93□□□□□ -0.02
TCF3-220ENST00000611869 KIF20BQ96Q89 1820 aa14.92□□□□□ -0.02
TCF3-220ENST00000611869 CYP19A1P11511 503 aaPredicted RBP14.92□□□□□ -0.02
TCF3-220ENST00000611869 NLRP12P59046 1061 aa14.92□□□□□ -0.02
TCF3-220ENST00000611869 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.92□□□□□ -0.02
TCF3-220ENST00000611869 CYP2E1P05181 493 aaPredicted RBP14.92□□□□□ -0.02
TCF3-220ENST00000611869 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
TCF3-220ENST00000611869 LRMPQ12912 555 aa14.92□□□□□ -0.02
TCF3-220ENST00000611869 PPP2R5BQ15173 497 aa14.92□□□□□ -0.02
TCF3-220ENST00000611869 GOLGA6L9A6NEM1 432 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 RESTQ13127 1097 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
TCF3-220ENST00000611869 ZSWIM5Q9P217 1185 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 NFE2L3Q9Y4A8 694 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 MRVI1Q9Y6F6 885 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 MYO5BQ9ULV0 1848 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 CCT6AP40227 531 aaKnown RBP14.91□□□□□ -0.02
TCF3-220ENST00000611869 MFSD14BQ5SR56 506 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 AXDND1Q5T1B0 1012 aaPredicted RBP14.91□□□□□ -0.02
TCF3-220ENST00000611869 PALLDQ8WX93 1383 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 TMEM132AQ24JP5 1023 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 SYT10Q6XYQ8 523 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 TXLNBQ8N3L3 684 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 SERTAD1Q9UHV2 236 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 ZNF804BA4D1E1 1349 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 POSTNQ15063 836 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 JAKMIP3Q5VZ66 844 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 KAZALD1Q96I82 304 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 INCENPQ9NQS7 918 aa14.91□□□□□ -0.02
TCF3-220ENST00000611869 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 GTF2IP78347 998 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 KARSQ15046 597 aaKnown RBP14.9□□□□□ -0.02
TCF3-220ENST00000611869 FAM114A1Q8IWE2 563 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 USP42Q9H9J4 1324 aaKnown RBP14.9□□□□□ -0.02
TCF3-220ENST00000611869 PPP1R12BO60237 982 aaPredicted RBP14.9□□□□□ -0.02
TCF3-220ENST00000611869 KIF20AO95235 890 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 FAM193AP78312 1265 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 KRT79Q5XKE5 535 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 RTEL1Q9NZ71 1219 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 CGNQ9P2M7 1197 aaKnown RBP14.9□□□□□ -0.02
TCF3-220ENST00000611869 ODF2Q5BJF6 829 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 OGFOD1Q8N543 542 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 XPO4Q9C0E2 1151 aaKnown RBP14.9□□□□□ -0.02
TCF3-220ENST00000611869 ARPP21Q9UBL0 812 aaPredicted RBP14.9□□□□□ -0.02
TCF3-220ENST00000611869 RCOR1Q9UKL0 485 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■■■ 36.7
TCF3-220ENST00000611869 TAF6LQ9Y6J9 622 aa14.9□□□□□ -0.02
TCF3-220ENST00000611869 CMA1P23946 247 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 ZNF827Q17R98 1081 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 STRBPQ96SI9 672 aaKnown RBP14.89□□□□□ -0.03
TCF3-220ENST00000611869 VEZTQ9HBM0 779 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 SIGLEC1Q9BZZ2 1709 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 EYA3Q99504 573 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 ARID4AP29374 1257 aaPredicted RBP14.89□□□□□ -0.03
TCF3-220ENST00000611869 TNIP1Q15025 636 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 CLEC17AQ6ZS10 378 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.89□□□□□ -0.03
TCF3-220ENST00000611869 CCDC102AQ96A19 550 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.03
TCF3-220ENST00000611869 LZTFL1Q9NQ48 299 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 AKR1B10O60218 316 aa14.89□□□□□ -0.03
TCF3-220ENST00000611869 DPP8Q6V1X1 898 aaPredicted RBP14.89□□□□□ -0.03
TCF3-220ENST00000611869 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
TCF3-220ENST00000611869 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
TCF3-220ENST00000611869 UBXN1Q04323 297 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 STOX1Q6ZVD7 989 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 VPS16Q9H269 839 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
TCF3-220ENST00000611869 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 USO1O60763 962 aaKnown RBP14.88□□□□□ -0.03
TCF3-220ENST00000611869 PNMA1Q8ND90 353 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 KCNQ2O43526 872 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 TCP10Q12799 353 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 TRIM28Q13263 835 aaKnown RBP14.88□□□□□ -0.03
TCF3-220ENST00000611869 WWC2Q6AWC2 1192 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 MLKLQ8NB16 471 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 LINC00301Q8NCQ3 95 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 UIMC1Q96RL1 719 aa14.88□□□□□ -0.03
TCF3-220ENST00000611869 CCNT1O60563 726 aaKnown RBP14.87□□□□□ -0.03
TCF3-220ENST00000611869 BLZF1Q9H2G9 400 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 SAMM50Q9Y512 469 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 CCDC175P0C221 793 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 GOLGA8HP0CJ92 632 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 TXKP42681 527 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 SLC39A14Q15043 492 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 TBC1D10CQ8IV04 446 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 SMARCC2Q8TAQ2 1214 aa14.87□□□□□ -0.03
TCF3-220ENST00000611869 SLU7O95391 586 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms