RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 BCL11AQ9H165 835 aa7.72□□□□□ -1.17
HDDC2-207ENST00000608532 ADAMTS4O75173 837 aa7.71□□□□□ -1.18
HDDC2-207ENST00000608532 RING1Q06587 406 aa7.71□□□□□ -1.18
HDDC2-207ENST00000608532 ARHGAP27Q6ZUM4 889 aa7.71□□□□□ -1.18
HDDC2-207ENST00000608532 FAM181AQ8N9Y4 354 aa7.71□□□□□ -1.18
HDDC2-207ENST00000608532 DUSP23Q9BVJ7 150 aa7.71□□□□□ -1.18
HDDC2-207ENST00000608532 ZC3H7BQ9UGR2 993 aaKnown RBP7.71□□□□□ -1.18
HDDC2-207ENST00000608532 SNCAIPQ9Y6H5 919 aa7.71□□□□□ -1.18
HDDC2-207ENST00000608532 GBP2P32456 591 aaPredicted RBP7.7□□□□□ -1.18
HDDC2-207ENST00000608532 TRIM26Q12899 539 aaPredicted RBP7.7□□□□□ -1.18
HDDC2-207ENST00000608532 MSMPQ1L6U9 139 aa7.7□□□□□ -1.18
HDDC2-207ENST00000608532 CYFIP1Q7L576 1253 aa7.7□□□□□ -1.18
HDDC2-207ENST00000608532 RELL1Q8IUW5 271 aa7.7□□□□□ -1.18
HDDC2-207ENST00000608532 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
HDDC2-207ENST00000608532 PHC3Q8NDX5 983 aa7.7□□□□□ -1.18
HDDC2-207ENST00000608532 WNT10AQ9GZT5 417 aa7.7□□□□□ -1.18
HDDC2-207ENST00000608532 ANGEL1Q9UNK9 670 aaKnown RBP7.7□□□□□ -1.18
HDDC2-207ENST00000608532 MINDY4BA8MYZ0 360 aa7.69□□□□□ -1.18
HDDC2-207ENST00000608532 WNT11O96014 354 aa7.69□□□□□ -1.18
HDDC2-207ENST00000608532 GRK4P32298 578 aa7.69□□□□□ -1.18
HDDC2-207ENST00000608532 ARMCX6Q7L4S7 300 aa7.69□□□□□ -1.18
HDDC2-207ENST00000608532 PSMG3-AS1Q96PY0 264 aa7.69□□□□□ -1.18
HDDC2-207ENST00000608532 FBRSQ9HAH7 460 aa7.69□□□□□ -1.18
HDDC2-207ENST00000608532 PRDM10Q9NQV6 1147 aa7.69□□□□□ -1.18
HDDC2-207ENST00000608532 PF4P02776 101 aa7.68□□□□□ -1.18
HDDC2-207ENST00000608532 ZNF16P17020 682 aaPredicted RBP7.68□□□□□ -1.18
HDDC2-207ENST00000608532 TSNAXIP1Q2TAA8 658 aa7.68□□□□□ -1.18
HDDC2-207ENST00000608532 DIEXFQ68CQ4 756 aaKnown RBP7.68□□□□□ -1.18
HDDC2-207ENST00000608532 BSDC1Q9NW68 430 aaPredicted RBP7.68□□□□□ -1.18
HDDC2-207ENST00000608532 GP2P55259 537 aaKnown RBP7.67□□□□□ -1.18
HDDC2-207ENST00000608532 FAM160A1Q05DH4 1040 aa7.67□□□□□ -1.18
HDDC2-207ENST00000608532 CAMK2GQ13555 558 aaPredicted RBP7.67□□□□□ -1.18
HDDC2-207ENST00000608532 BNC2Q6ZN30 1099 aaPredicted RBP7.67□□□□□ -1.18
HDDC2-207ENST00000608532 GFRA2O00451 464 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 LRIG2O94898 1065 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 BPNT1O95861 308 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 PGRP06401 933 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 ITIH2P19823 946 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 NKG7Q16617 165 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 SNAP47Q5SQN1 464 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 HID1Q8IV36 788 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 PLD6Q8N2A8 252 aaKnown RBP7.66□□□□□ -1.18
HDDC2-207ENST00000608532 FLCNQ8NFG4 579 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 XAGE3Q8WTP9 111 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 TMEM74Q96NL1 305 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 CCDC39Q9UFE4 941 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 OAS3Q9Y6K5 1087 aaKnown RBP7.66□□□□□ -1.18
HDDC2-207ENST00000608532 U3KQE9 123 aa7.66□□□□□ -1.18
HDDC2-207ENST00000608532 RPL6Q02878 288 aaKnown RBP7.65□□□□□ -1.18
HDDC2-207ENST00000608532 LMNB2Q03252 620 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 PWP1Q13610 501 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 MRPL58Q14197 206 aaKnown RBP7.65□□□□□ -1.18
HDDC2-207ENST00000608532 SLBPQ14493 270 aaKnown RBP eCLIP7.65□□□□□ -1.18
HDDC2-207ENST00000608532 VSIG10LQ86VR7 867 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 TP53INP2Q8IXH6 220 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 MIPEPQ99797 713 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 RSRP1Q9BUV0 290 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 COPRSQ9NQ92 184 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 KBTBD4Q9NVX7 518 aa7.65□□□□□ -1.18
HDDC2-207ENST00000608532 F13A1P00488 732 aa7.64□□□□□ -1.19
HDDC2-207ENST00000608532 PRAMEF13Q5VWM6 474 aa7.64□□□□□ -1.19
HDDC2-207ENST00000608532 NETO1Q8TDF5 533 aa7.64□□□□□ -1.19
HDDC2-207ENST00000608532 HEXIM2Q96MH2 286 aaKnown RBP7.64□□□□□ -1.19
HDDC2-207ENST00000608532 GTF2IRD1Q9UHL9 959 aa7.64□□□□□ -1.19
HDDC2-207ENST00000608532 GGT7Q9UJ14 662 aa7.64□□□□□ -1.19
HDDC2-207ENST00000608532 TPX2Q9ULW0 747 aaKnown RBP7.64□□□□□ -1.19
HDDC2-207ENST00000608532 SLITRK5O94991 958 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 PRNPP04156 253 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 OXCT1P55809 520 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 PDE4BQ07343 736 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 BNIP3Q12983 259 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 GOLM1Q8NBJ4 401 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 TMEM87AQ8NBN3 555 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 RHOVQ96L33 236 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 DPH2Q9BQC3 489 aaPredicted RBP7.63□□□□□ -1.19
HDDC2-207ENST00000608532 CORINQ9Y5Q5 1042 aa7.63□□□□□ -1.19
HDDC2-207ENST00000608532 TLR3O15455 904 aaKnown RBP7.62□□□□□ -1.19
HDDC2-207ENST00000608532 EOMESO95936 686 aa7.62□□□□□ -1.19
HDDC2-207ENST00000608532 CEACAM5P06731 702 aa7.62□□□□□ -1.19
HDDC2-207ENST00000608532 ZNF574Q6ZN55 896 aaPredicted RBP7.62□□□□□ -1.19
HDDC2-207ENST00000608532 CCDC84Q86UT8 332 aaPredicted RBP7.62□□□□□ -1.19
HDDC2-207ENST00000608532 GATAD2BQ8WXI9 593 aa7.62□□□□□ -1.19
HDDC2-207ENST00000608532 PRDM5Q9NQX1 630 aaPredicted RBP7.62□□□□□ -1.19
HDDC2-207ENST00000608532 TJP2Q9UDY2 1190 aa7.62□□□□□ -1.19
HDDC2-207ENST00000608532 SLC5A6Q9Y289 635 aa7.62□□□□□ -1.19
HDDC2-207ENST00000608532 TACC3Q9Y6A5 838 aa7.62□□□□□ -1.19
HDDC2-207ENST00000608532 GNAT3A8MTJ3 354 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 CILPO75339 1184 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 CST3P01034 146 aaPredicted RBP7.61□□□□□ -1.19
HDDC2-207ENST00000608532 PLCG1P19174 1290 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 IRAK1P51617 712 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 IFI16Q16666 785 aaKnown RBP7.61□□□□□ -1.19
HDDC2-207ENST00000608532 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 HS2ST1Q7LGA3 356 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 ERMP1Q7Z2K6 904 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 ABI1Q8IZP0 508 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 MFSD2AQ8NA29 543 aa7.61□□□□□ -1.19
HDDC2-207ENST00000608532 BCL7CQ8WUZ0 217 aaPredicted RBP7.61□□□□□ -1.19
HDDC2-207ENST00000608532 FBXL18Q96ME1 805 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms