RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 HERC5Q9UII4 1024 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 PTPRFP10586 1907 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 RBBP6Q7Z6E9 1792 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
CTSA-213ENST00000606782 TBC1D2Q9BYX2 928 aa16.3■□□□□ 0.2
CTSA-213ENST00000606782 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
CTSA-213ENST00000606782 PI4KBQ9UBF8 816 aa16.3■□□□□ 0.2
CTSA-213ENST00000606782 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
CTSA-213ENST00000606782 EXOC6BQ9Y2D4 811 aa16.3■□□□□ 0.2
CTSA-213ENST00000606782 MAST2Q6P0Q8 1798 aa16.3■□□□□ 0.2
CTSA-213ENST00000606782 MYO5AQ9Y4I1 1855 aaKnown RBP16.29■□□□□ 0.2
CTSA-213ENST00000606782 POTEFA5A3E0 1075 aa16.29■□□□□ 0.2
CTSA-213ENST00000606782 CTGFP29279 349 aa16.29■□□□□ 0.2
CTSA-213ENST00000606782 CAP2P40123 477 aa16.29■□□□□ 0.2
CTSA-213ENST00000606782 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
CTSA-213ENST00000606782 EXOC6Q8TAG9 804 aa16.29■□□□□ 0.2
CTSA-213ENST00000606782 FAM196BA6NMK8 535 aa16.28■□□□□ 0.2
CTSA-213ENST00000606782 IRX6P78412 446 aaPredicted RBP16.28■□□□□ 0.2
CTSA-213ENST00000606782 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
CTSA-213ENST00000606782 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
CTSA-213ENST00000606782 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
CTSA-213ENST00000606782 FOXP4Q8IVH2 680 aaPredicted RBP16.28■□□□□ 0.2
CTSA-213ENST00000606782 SIRT2Q8IXJ6 389 aa16.28■□□□□ 0.2
CTSA-213ENST00000606782 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
CTSA-213ENST00000606782 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
CTSA-213ENST00000606782 SRRDQ9UH36 339 aa16.28■□□□□ 0.2
CTSA-213ENST00000606782 FLT1P17948 1338 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 ZSWIM8A7E2V4 1837 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 CYP2C8P10632 490 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 HOXD10P28358 340 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 PSMC4P43686 418 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 AACSQ86V21 672 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 PROCA1Q8NCQ7 364 aaPredicted RBP16.27■□□□□ 0.2
CTSA-213ENST00000606782 TGFBRAP1Q8WUH2 860 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
CTSA-213ENST00000606782 AGTPBP1Q9UPW5 1226 aa16.27■□□□□ 0.2
CTSA-213ENST00000606782 CDK5RAP2Q96SN8 1893 aa16.27■□□□□ 0.19
CTSA-213ENST00000606782 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 FOCADQ5VW36 1801 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 TRIM75PA6NK02 468 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 HMMRO75330 724 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 CYP7A1P22680 504 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 SH3D19Q5HYK7 790 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 PRPF38BQ5VTL8 546 aaKnown RBP16.26■□□□□ 0.19
CTSA-213ENST00000606782 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 ZNF280CQ8ND82 737 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
CTSA-213ENST00000606782 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
CTSA-213ENST00000606782 OSBPP22059 807 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 SPP2Q13103 211 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
CTSA-213ENST00000606782 MAPKAPK5Q8IW41 473 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.25■□□□□ 0.19
CTSA-213ENST00000606782 KIF1BPQ96EK5 621 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 WDR18Q9BV38 432 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 TMEM106CQ9BVX2 250 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 ANTXR1Q9H6X2 564 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 DNAJC18Q9H819 358 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 PCDHB15Q9Y5E8 787 aa16.25■□□□□ 0.19
CTSA-213ENST00000606782 RAB11FIP3O75154 756 aa16.24■□□□□ 0.19
CTSA-213ENST00000606782 ASNSP08243 561 aa16.24■□□□□ 0.19
CTSA-213ENST00000606782 DYNLL1P63167 89 aaKnown RBP16.24■□□□□ 0.19
CTSA-213ENST00000606782 MAP3K12Q12852 859 aa16.24■□□□□ 0.19
CTSA-213ENST00000606782 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
CTSA-213ENST00000606782 IL1RAPL2Q9NP60 686 aa16.24■□□□□ 0.19
CTSA-213ENST00000606782 PALD1Q9ULE6 856 aa16.24■□□□□ 0.19
CTSA-213ENST00000606782 CENPFP49454 3210 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 FMNL1O95466 1100 aaPredicted RBP16.23■□□□□ 0.19
CTSA-213ENST00000606782 EN2P19622 333 aaPredicted RBP16.23■□□□□ 0.19
CTSA-213ENST00000606782 FCGRTP55899 365 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
CTSA-213ENST00000606782 TREML2Q5T2D2 321 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 MAGEB6Q8N7X4 407 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 AS3MTQ9HBK9 375 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 ATAD5Q96QE3 1844 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 LOC285556D6RIA3 1793 aa16.23■□□□□ 0.19
CTSA-213ENST00000606782 JAG1P78504 1218 aa16.22■□□□□ 0.19
CTSA-213ENST00000606782 SH3TC2Q8TF17 1288 aa16.22■□□□□ 0.19
CTSA-213ENST00000606782 RIOK1Q9BRS2 568 aaKnown RBP16.22■□□□□ 0.19
CTSA-213ENST00000606782 MGAMO43451 1857 aa16.22■□□□□ 0.19
CTSA-213ENST00000606782 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 HLA-DOAP06340 250 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 GRK4P32298 578 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 HMGCS2P54868 508 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 BACE1P56817 501 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.19
CTSA-213ENST00000606782 FAM110CQ1W6H9 321 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 TATDN1Q6P1N9 297 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 RAET1EQ8TD07 263 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 EHD4Q9H223 541 aa16.21■□□□□ 0.19
CTSA-213ENST00000606782 C19orf81C9J6K1 198 aa16.2■□□□□ 0.18
CTSA-213ENST00000606782 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
CTSA-213ENST00000606782 GCLCP48506 637 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms